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Nucleotide sequencing

A novel enterovirus species identified from severe diarrheal goats

Mingyue Wang, Jia He, Haibing Lu, Yajing Liu, Yingrui Deng, Lisai Zhu, Changming Guo, Changchun Tu, Xinping Wang

published 04 Apr 2017

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Deep sequencing is an appropriate tool for the selection of unique Hepatitis C virus (HCV) variants after single genomic amplification

Thibault Guinoiseau, Alain Moreau, Guillaume Hohnadel, Nicole Ngo-Giang-Huong, Celine Brulard, Patrick Vourc’h, Alain Goudeau, Catherine Gaudy-Graffin

published 31 Mar 2017

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On DNA numerical representations for genomic similarity computation

Gerardo Mendizabal-Ruiz, Israel Román-Godínez, Sulema Torres-Ramos, Ricardo A. Salido-Ruiz, J. Alejandro Morales

published 21 Mar 2017

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Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and backtracking in yeast

Martin Lukačišin, Matthieu Landon, Rishi Jajoo

published 16 Mar 2017

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Dynamic time warping assessment of high-resolution melt curves provides a robust metric for fungal identification

Sha Lu, Gordana Mirchevska, Sayali S. Phatak, Dongmei Li, Janos Luka, Richard A. Calderone, William A. Fonzi

published 06 Mar 2017

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GLM-based optimization of NGS data analysis: A case study of Roche 454, Ion Torrent PGM and Illumina NextSeq sequencing data

Sarah Sandmann, Aniek O. de Graaf, Bert A. van der Reijden, Joop H. Jansen, Martin Dugas

published 21 Feb 2017

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Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams

Shigeru Shimamura, Takashi Kaneko, Genki Ozawa, Mamiko Nishino Matsumoto, Takeru Koshiishi, Yoshihiro Takaki, Chiaki Kato, Ken Takai, Takao Yoshida, Katsunori Fujikura, James P. Barry, Tadashi Maruyama

published 15 Feb 2017

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Development, identification and validation of CAPS marker for SHELL trait which governs dura, pisifera and tenera fruit forms in oil palm (Elaeis guineensis Jacq.)

B. Kalyana Babu, R. K. Mathur, P. Naveen Kumar, D. Ramajayam, G. Ravichandran, M. V. B. Venu, S. Sparjan Babu

published 13 Feb 2017

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Multi-locus genotypes of Enterocytozoon bieneusi in captive Asiatic black bears in southwestern China: High genetic diversity, broad host range, and zoonotic potential

Lei Deng, Wei Li, Zhijun Zhong, Chao Gong, Xuefeng Cao, Yuan Song, Wuyou Wang, Xiangming Huang, Xuehan Liu, Yanchun Hu, Hualin Fu, Min He, Ya Wang, Yue Zhang, Kongju Wu, Guangneng Peng

published 09 Feb 2017

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Genetic structure and distribution of Parisotoma notabilis (Collembola) in Europe: Cryptic diversity, split of lineages and colonization patterns

Helge von Saltzwedel, Stefan Scheu, Ina Schaefer

published 07 Feb 2017

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Exome sequencing covers >98% of mutations identified on targeted next generation sequencing panels

Holly LaDuca, Kelly D. Farwell, Huy Vuong, Hsiao-Mei Lu, Wenbo Mu, Layla Shahmirzadi, Sha Tang, Jefferey Chen, Shruti Bhide, Elizabeth C. Chao

published 02 Feb 2017

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E6 and E7 Gene Polymorphisms in Human Papillomavirus Types-58 and 33 Identified in Southwest China

Zuyi Chen, Yaling Jing, Qiang Wen, Xianping Ding, Tao Wang, Xuemei Mu, Yuwei Chenzhang, Man Cao

published 31 Jan 2017

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Creation of Novel Protein Variants with CRISPR/Cas9-Mediated Mutagenesis: Turning a Screening By-Product into a Discovery Tool

Katherine F. Donovan, Mudra Hegde, Meagan Sullender, Emma W. Vaimberg, Cory M. Johannessen, David E. Root, John G. Doench

published 24 Jan 2017

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