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Nucleotide sequencing

Variant genotyping with gap filling

Riku Walve, Leena Salmela, Veli Mäkinen

published 08 Sep 2017

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Transcriptomic profile of cystic fibrosis patients identifies type I interferon response and ribosomal stalk proteins as potential modifiers of disease severity

Michael S. D. Kormann, Alexander Dewerth, Felizitas Eichner, Praveen Baskaran, Andreas Hector, Nicolas Regamey, Dominik Hartl, Rupert Handgretinger, Justin S. Antony

published 28 Aug 2017

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Can quartet analyses combining maximum likelihood estimation and Hennigian logic overcome long branch attraction in phylogenomic sequence data?

Patrick Kück, Mark Wilkinson, Christian Groß, Peter G. Foster, Johann W. Wägele

published 25 Aug 2017

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Investigation of potential targets of Porphyromonas CRISPRs among the genomes of Porphyromonas species

Takayasu Watanabe, Masaki Shibasaki, Fumito Maruyama, Tsutomu Sekizaki, Ichiro Nakagawa

published 24 Aug 2017

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The remnant of the European rabbit (Oryctolagus cuniculus) IgD gene

Dennis K. Lanning, Pedro J. Esteves, Katherine L. Knight

published 23 Aug 2017

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A comprehensive profiling of T- and B-lymphocyte receptor repertoires from a Chinese-origin rhesus macaque by high-throughput sequencing

Longfei Fu, Xinyang Li, Wei Zhang, Changxi Wang, Jinghua Wu, Huanming Yang, Jian Wang, Xiao Liu

published 16 Aug 2017

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Molecular characterization and multi-locus genotypes of Enterocytozoon bieneusi from captive red kangaroos (Macropus Rfus) in Jiangsu province, China

Zhijun Zhong, Yinan Tian, Yuan Song, Lei Deng, Junxian Li, Zhihua Ren, Xiaoping Ma, Xiaobin Gu, Changliang He, Yi Geng, Guangneng Peng

published 14 Aug 2017

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Exact correspondence between walk in nucleotide and protein sequence spaces

Dmitry N. Ivankov

published 11 Aug 2017

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Comparison of alternative approaches for analysing multi-level RNA-seq data

Irina Mohorianu, Amanda Bretman, Damian T. Smith, Emily K. Fowler, Tamas Dalmay, Tracey Chapman

published 08 Aug 2017

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Classification of the Pospiviroidae based on their structural hallmarks

Tamara Giguère, Jean-Pierre Perreault

published 04 Aug 2017

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Versatile ion S5XL sequencer for targeted next generation sequencing of solid tumors in a clinical laboratory

Meenakshi Mehrotra, Dzifa Yawa Duose, Rajesh R. Singh, Bedia A. Barkoh, Jawad Manekia, Michael A. Harmon, Keyur P. Patel, Mark J. Routbort, L. Jeffrey Medeiros, Ignacio I. Wistuba, Rajyalakshmi Luthra

published 02 Aug 2017

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metaSNV: A tool for metagenomic strain level analysis

Paul Igor Costea, Robin Munch, Luis Pedro Coelho, Lucas Paoli, Shinichi Sunagawa, Peer Bork

published 28 Jul 2017

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NS3 genomic sequencing and phylogenetic analysis as alternative to a commercially available assay to reliably determine hepatitis C virus subtypes 1a and 1b

Karin Neukam, Alfredo P. Martínez, Andrés C. A. Culasso, Ezequiel Ridruejo, Gabriel García, Federico A. Di Lello

published 28 Jul 2017

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