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Nucleotide sequencing

Qualitative and quantitative assessment of Illumina’s forensic STR and SNP kits on MiSeq FGx™

Vishakha Sharma, Hoi Yan Chow, Donald Siegel, Elisa Wurmbach

published 09 Nov 2017

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Single primer isothermal amplification (SPIA) combined with next generation sequencing provides complete bovine coronavirus genome coverage and higher sequence depth compared to sequence-independent single primer amplification (SISPA)

Mette Myrmel, Veslemøy Oma, Mamata Khatri, Hanne H. Hansen, Maria Stokstad, Mikael Berg, Anne-Lie Blomström

published 07 Nov 2017

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Spoligotyping and whole-genome sequencing analysis of lineage 1 strains of Mycobacterium tuberculosis in Da Nang, Vietnam

Minako Hijikata, Naoto Keicho, Le Van Duc, Shinji Maeda, Nguyen Thi Le Hang, Ikumi Matsushita, Seiya Kato

published 19 Oct 2017

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Diversity and microevolution of CRISPR loci in Helicobacter cinaedi

Junko Tomida, Yuji Morita, Keigo Shibayama, Ken Kikuchi, Tomohiro Sawa, Takaaki Akaike, Yoshiaki Kawamura

published 13 Oct 2017

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PICKLE 2.0: A human protein-protein interaction meta-database employing data integration via genetic information ontology

Aris Gioutlakis, Maria I. Klapa, Nicholas K. Moschonas

published 12 Oct 2017

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Evaluation of a DNA-based method for spice/herb authentication, so you do not have to worry about what is in your curry, buon appetito!

Maslin Osathanunkul, Sarawut Ounjai, Rossarin Osathanunkul, Panagiotis Madesis

published 11 Oct 2017

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Promoter variants of Xa23 alleles affect bacterial blight resistance and evolutionary pattern

Hua Cui, Chunlian Wang, Tengfei Qin, Feifei Xu, Yongchao Tang, Ying Gao, Kaijun Zhao

published 05 Oct 2017

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The folded k-spectrum kernel: A machine learning approach to detecting transcription factor binding sites with gapped nucleotide dependencies

Abdulkadir Elmas, Xiaodong Wang, Jacqueline M. Dresch

published 05 Oct 2017

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On site DNA barcoding by nanopore sequencing

Michele Menegon, Chiara Cantaloni, Ana Rodriguez-Prieto, Cesare Centomo, Ahmed Abdelfattah, Marzia Rossato, Massimo Bernardi, Luciano Xumerle, Simon Loader, Massimo Delledonne

published 04 Oct 2017

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Universal detection of phytoplasmas and Xylella spp. by TaqMan singleplex and multiplex real-time PCR with dual priming oligonucleotides

Takao Ito, Koichi Suzaki

published 28 Sep 2017

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Genetic diversity of Entamoeba: Novel ribosomal lineages from cockroaches

Tetsuro Kawano, Mihoko Imada, Pennapa Chamavit, Seiki Kobayashi, Tetsuo Hashimoto, Tomoyoshi Nozaki

published 21 Sep 2017

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Surveillance of norovirus among children with diarrhea in four major hospitals in Bhutan: Replacement of GII.21 by GII.3 as a dominant genotype

Sonam Wangchuk, Takashi Matsumoto, Hidekatsu Iha, Kamruddin Ahmed

published 14 Sep 2017

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Distinct genetic clades of enterovirus D68 detected in 2010, 2013, and 2015 in Osaka City, Japan

Atsushi Kaida, Nobuhiro Iritani, Seiji P. Yamamoto, Daiki Kanbayashi, Yuki Hirai, Masao Togawa, Kiyoko Amo, Urara Kohdera, Toshinori Nishigaki, Masashi Shiomi, Sadasaburo Asai, Tsutomu Kageyama, Hideyuki Kubo

published 13 Sep 2017

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