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Nucleotide sequencing

Massively parallel sequencing of micro-manipulated cells targeting a comprehensive panel of disease-causing genes: A comparative evaluation of upstream whole-genome amplification methods

Lieselot Deleye, Yannick Gansemans, Dieter De Coninck, Filip Van Nieuwerburgh, Dieter Deforce

published 26 Apr 2018

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Data quality of whole genome bisulfite sequencing on Illumina platforms

Amanda Raine, Ulrika Liljedahl, Jessica Nordlund

published 18 Apr 2018

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Distinctive variation in the U3R region of the 5' Long Terminal Repeat from diverse HIV-1 strains

Christelle Mbondji-wonje, Ming Dong, Xue Wang, Jiangqin Zhao, Viswanath Ragupathy, Ana M. Sanchez, Thomas N. Denny, Indira Hewlett

published 17 Apr 2018

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SeedVicious: Analysis of microRNA target and near-target sites

Antonio Marco

published 17 Apr 2018

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Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska

Andrew B. Reeves, Jeffrey S. Hall, Rebecca L. Poulson, Tyrone Donnelly, David E. Stallknecht, Andrew M. Ramey

published 05 Apr 2018

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Reassembling haplotypes in a mixture of pooled amplicons when the relative concentrations are known: A proof-of-concept study on the efficient design of next-generation sequencing strategies

Louis Ranjard, Thomas K. F. Wong, Allen G. Rodrigo

published 05 Apr 2018

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Case-based surveillance of measles in Sicily during 2012-2017: The changing molecular epidemiology and implications for vaccine strategies

Fabio Tramuto, Carmelo Massimo Maida, Fanny Pojero, Giuseppina Maria Elena Colomba, Alessandra Casuccio, Vincenzo Restivo, Francesco Vitale

published 04 Apr 2018

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Detection of sister-species in invasive populations of the fall armyworm Spodoptera frugiperda (Lepidoptera: Noctuidae) from Uganda

Michael H. Otim, Wee Tek Tay, Thomas K. Walsh, Dalton Kanyesigye, Stella Adumo, Joseph Abongosi, Stephen Ochen, Julius Sserumaga, Simon Alibu, Grace Abalo, Godfrey Asea, Ambrose Agona

published 03 Apr 2018

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Insights into DNA substrate selection by APOBEC3G from structural, biochemical, and functional studies

Samantha J. Ziegler, Chang Liu, Mark Landau, Olga Buzovetsky, Belete A. Desimmie, Qi Zhao, Tomoaki Sasaki, Ryan C. Burdick, Vinay K. Pathak, Karen S. Anderson, Yong Xiong

published 29 Mar 2018

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Worldwide increased prevalence of human adenovirus type 3 (HAdV-3) respiratory infections is well correlated with heterogeneous hypervariable regions (HVRs) of hexon

Ezazul Haque, Urmila Banik, Tahmina Monwar, Leela Anthony, Arun Kumar Adhikary

published 28 Mar 2018

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Avian viral surveillance in Victoria, Australia, and detection of two novel avian herpesviruses

Jemima Amery-Gale, Carol A. Hartley, Paola K. Vaz, Marc S. Marenda, Jane Owens, Paul A. Eden, Joanne M. Devlin

published 23 Mar 2018

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Early MinION^™ nanopore single-molecule sequencing technology enables the characterization of hepatitis B virus genetic complexity in clinical samples

Virginie Sauvage, Laure Boizeau, Daniel Candotti, Mathias Vandenbogaert, Annabelle Servant-Delmas, Valérie Caro, Syria Laperche

published 22 Mar 2018

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CCAAT-enhancer binding protein-α (C/EBPα) and hepatocyte nuclear factor 4α (HNF4α) regulate expression of the human fructose-1,6-bisphosphatase 1 (FBP1) gene in human hepatocellular carcinoma HepG2 cells

Siriluck Wattanavanitchakorn, Pinnara Rojvirat, Tanit Chavalit, Michael J. MacDonald, Sarawut Jitrapakdee

published 22 Mar 2018

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