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Nucleotide sequencing

A workflow with R: Phylogenetic analyses and visualizations using mitochondrial cytochrome b gene sequences

Emine Toparslan, Kemal Karabag, Ugur Bilge

published 15 Dec 2020

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Antifreeze protein dispersion in eelpouts and related fishes reveals migration and climate alteration within the last 20 Ma

Rod S. Hobbs, Jennifer R. Hall, Laurie A. Graham, Peter L. Davies, Garth L. Fletcher

published 15 Dec 2020

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Genetic diversity, haplotype analysis, and risk factor assessment of hepatitis A virus isolates from the West Bank, Palestine during the period between 2014 and 2016

Kamal Dumaidi, Hayah Qaraqe, Amer Al-Jawabreh, Rasmi Abu-Helu, Fekri Samarah, Hanan Al-Jawabreh

published 11 Dec 2020

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SeqRepo: A system for managing local collections of biological sequences

Reece K. Hart, Andreas Prlić

published 03 Dec 2020

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Requirements for efficient ligand-gated co-transcriptional switching in designed variants of the B. subtilis pbuE adenine-responsive riboswitch in E. coli

Lea K. Drogalis, Robert T. Batey

published 01 Dec 2020

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Molecular epidemiology and surveillance of circulating rotavirus among children with gastroenteritis in Bangladesh during 2014–2019

Shuvra Kanti Dey, Nadim Sharif, Omar Sadi Sarkar, Mithun Kumar Sarkar, Ali Azam Talukder, Tung Phan, Hiroshi Ushijima

published 30 Nov 2020

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Shotgun metagenome sequencing identification of a set of genes encoded by Actinomyces associated with medication-related osteonecrosis of the jaw

Hiroko Yahara, Akimitsu Hiraki, Yutaka Maruoka, Aki Hirabayashi, Masato Suzuki, Koji Yahara

published 30 Nov 2020

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Characterization and complete genome sequences of two novel variants of the family Closteroviridae from Chinese kiwifruit

Xin Feng, Rui-lian Lai, Min-xia Gao, Wen-guang Chen, Ru-jian Wu, Chun-zhen Cheng, Yi-ting Chen

published 23 Nov 2020

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In silico characterisation of stand-alone response regulators of Streptococcus pyogenes

Sean J. Buckley, Mark R. Davies, David J. McMillan

published 19 Oct 2020

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Identification of the major rabbit and guinea pig semen coagulum proteins and description of the diversity of the REST gene locus in the mammalian clade Glires

Åke Lundwall, Margareta Persson, Karin Hansson, Magnus Jonsson

published 14 Oct 2020

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Taxonomic profiling of individual nematodes isolated from copse soils using deep amplicon sequencing of four distinct regions of the 18S ribosomal RNA gene

Harutaro Kenmotsu, Kiichi Uchida, Yuu Hirose, Toshihiko Eki

published 07 Oct 2020

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A comparative study of single nucleotide variant detection performance using three massively parallel sequencing methods

Linea Christine Trudsø, Jeppe Dyrberg Andersen, Stine Bøttcher Jacobsen, Sofie Lindgren Christiansen, Clàudia Congost-Teixidor, Marie-Louise Kampmann, Niels Morling

published 28 Sep 2020

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Molecular epidemiology of mumps viruses in the Netherlands, 2017-2019

Rogier Bodewes, Linda Reijnen, Jeroen Kerkhof, Jeroen Cremer, Dennis Schmitz, Rob van Binnendijk, Irene K. Veldhuijzen

published 14 Sep 2020

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