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Nucleotide sequencing

Deep learning framework for RNA 5hmC prediction using RNA language model embeddings

Md Muhaiminul Islam Nafi

published 03 Feb 2026

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Molecular characterization and phylogenetic analysis of major envelope protein gene (B2L) and ATPase protein gene (A32L) of orf virus isolates from goats in Southern, Thailand

Wongkae Watjiranon, Chya Vannakovida, Thanidtha Te-Chaniyom, Natakorn Nokchan, Syriam Sooksawasdi Na Ayudhya

published 30 Jan 2026

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Identification of genes that differentiate Mannheimia haemolytica genotypes 1 and 2 using a pangenome approach

Darien Deschner, Janet E. Hill

published 16 Oct 2025

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Evaluating topological variability in Neodermata phylogenies using mitochondrial and ribosomal gene markers

Víctor Hugo Caña-Bozada, Geormery Belén Mera-Loor, David I. Hernández-Mena, Jean-Lou Justine, Marta Álvarez-Presas

published 15 Oct 2025

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Mitochondrial polymorphism of sea beet (Beta vulgaris ssp. maritima), a species with cytoplasmic male sterility

Tomoki Murata, Hiroyo Kagami-Katsuyama, Mion Oishi, Haruto Tanaka, Chihiro Sano, Jun Kashikura, Ryo Hayakawa, Keishi Kubota, Eigo Taniguchi, Keita Suzuki, Kazuyoshi Kitazaki, Tomohiko Kubo

published 23 Sep 2025

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A single PCR-sequencing method to establish the frequency of kdr alleles in the stable fly, Stomoxys calcitrans: application to seven livestock farms from south of France

Mariana Ribeiro Sato, Géraldine Bossard, Guilhem Sempere, Philippe Jacquiet, Christelle Grisez, Geoffrey Gimonneau, Marc Desquesnes

published 16 Sep 2025

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Identification of BOLD engine deficiencies and suggestions for improvement based on a curated Tachina (Diptera) record set

Frederik Stein, Oliver Gailing

published 29 Aug 2025

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Future Sequon Finder - A novel approach for predicting future N-linked glycosylation sequon locations on viral surface proteins

Shane P. Bryan, Martin S. Zand

published 14 Aug 2025

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Molecular characterization of indigenous human adenovirus (HAdV) isolate from healthy infant stool sample and screening of its antibodies in archival serum samples in Türkiye

Zafer Yazici, Huseyin Baskin, Seda Gozel, Hanne Nur Kurucay, Cuneyt Tamer, Hamza Kadi, Emre Ozan, Bahadir Muftuoglu, Vahide Bayrakal, Harun Albayrak, Semra Okur-Gumusova, Ahmed Eisa Elhag

published 18 Jul 2025

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Seasonal dynamics and molecular phylogenetic studies on cercariae in Central Zone of Kashmir valley

Zahoor Ahmad Wani, Rafiq A. Shahardar, Kamal H. Bulbul, Idrees M. Allaie, Showkat A. Shah, Shabir A. Rather, Aiman Ashraf, Shahana Tramboo, Asif H. Khan

published 10 Jul 2025

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Optimizing genomic diversity assessments for conservation of Bromus auleticus (Trinius ex Nees) using individual and pooled sequencing

Luciana Gillman, Federico Condón, Cesar Petroli, Mercedes Rivas

published 25 Jun 2025

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rbpTransformer: A novel deep learning model for prediction of piRNA and mRNA bindings

Ahmet Gürhanlı

published 25 Jun 2025

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DeepRice6mA: A convolutional neural network approach for 6mA site prediction in the rice Genome

Hussam Alsharif

published 18 Jun 2025

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