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Nucleic acid analysis

SARS-CoV-2 Delta variant remains viable in environmental biofilms found in meat packaging plants

Austin B. Featherstone, Arnold J. T. M. Mathijssen, Amanda Brown, Sapna Chitlapilly Dass

published 13 Jun 2024

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Loss of the yeast transporter Agp2 upregulates the pleiotropic drug-resistant pump Pdr5 and confers resistance to the protein synthesis inhibitor cycloheximide

Yusra Manzoor, Mustapha Aouida, Ramya Ramadoss, Balasubramanian Moovarkumudalvan, Nisar Ahmed, Abdallah Alhaj Sulaiman, Ashima Mohanty, Reem Ali, Borbala Mifsud, Dindial Ramotar

published 22 May 2024

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PAI-1 mediates acquired resistance to MET-targeted therapy in non-small cell lung cancer

Yin Min Thu, Ken Suzawa, Shuta Tomida, Kosuke Ochi, Shimpei Tsudaka, Fumiaki Takatsu, Keiichi Date, Naoki Matsuda, Kazuma Iwata, Kentaro Nakata, Kazuhiko Shien, Hiromasa Yamamoto, Mikio Okazaki, Seiichiro Sugimoto, Shinichi Toyooka

published 17 May 2024

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Improving the efficiency of adaptive management methods in multiple fishways using environmental DNA

Masahiko Nakai, Taku Masumoto, Takashi Asaeda, Mizanur Rahman

published 01 Apr 2024

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Proteomic and transcriptomic characterisation of FIA10, a novel murine leukemic cell line that metastasizes into the brain

Ursula Just, Helmut Burtscher, Sylvia Jeratsch, Meike Fischer, Carol Stocking, Jens Preussner, Mario Looso, Ralf Schwanbeck, Stefan Günther, Ralf Huss, Lynne Mullen, Thomas Braun

published 12 Jan 2024

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A universal protocol for high-quality DNA and RNA isolation from diverse plant species

Farhad Masoomi-Aladizgeh, Leila Jabbari, Reza Khayam Nekouei, Ali Aalami, Brian J. Atwell, Paul A. Haynes

published 14 Dec 2023

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Whole blood RNA extraction efficiency contributes to variability in RNA sequencing data sets

William W. Wilfinger, Hamid R. Eghbalnia, Karol Mackey, Robert Miller, Piotr Chomczynski

published 16 Nov 2023

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A novel f-divergence based generative adversarial imputation method for scRNA-seq data analysis

Tong Si, Zackary Hopkins, John Yanev, Jie Hou, Haijun Gong

published 10 Nov 2023

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RNA-seq RNAaccess identified as the preferred method for gene expression analysis of low quality FFPE samples

Kai Song, Emon Elboudwarej, Xi Zhao, Luting Zhuo, David Pan, Jinfeng Liu, Carrie Brachmann, Scott D. Patterson, Oh Kyu Yoon, Marianna Zavodovskaya

published 26 Oct 2023

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Scikick: A sidekick for workflow clarity and reproducibility during extensive data analysis

Matthew Carlucci, Tadas Bareikis, Karolis Koncevičius, Povilas Gibas, Algimantas Kriščiūnas, Art Petronis, Gabriel Oh

published 27 Jul 2023

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Expression analysis of box C/D snoRNAs with SNPs between C57BL/6 and MSM/Ms strains in male mouse

Rumiko Saito, Maina Otsu, Hidenori Kiyosawa, Gota Kawai

published 10 Jul 2023

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On-site detection system of Candidatus Liberibacter asiaticus by using TaqMan probe-based insulated isothermal polymerase chain reaction (iiPCR)

Shun-Min Yao, Meng-Ling Wu, Ting-Hsuan Hung

published 23 Jun 2023

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Identification of curaxin as a potential new therapeutic for JAK2 V617F mutant patients

Stella Pearson, Rognvald Blance, Fei Yan, Ya-Ching Hsieh, Bethany Geary, Fabio M. R. Amaral, Tim C. P. Somervaille, Kristina Kirschner, Anthony D. Whetton, Andrew Pierce

published 30 May 2023

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