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Nucleic acid analysis

Exosomal miRNA expression profiling in patients with imatinib resistant Chronic myeloid leukemia: A pilot study

Raphatphorn Navakanitworakul, Pirun Saelue, Tipparat Penglong, Piyatida Molika, Natakorn Nokchan, Natta Tansila, Hansuk Buncherd, Supinya Thanapongpichat, Kanitta Srinoun

published 29 Aug 2025

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Reliable RNA-seq analysis from FFPE specimens as a means to accelerate cancer-related health disparities research

Mitchell J. Frederick, Dannelys Perez-Bello, Pedram Yadollahi, Patricia Castro, Alan Frederick, Andrew Frederick, Rashid A. Osman, Fonma Essien, Imelda Yebra, Ashley Hamlin, Thomas J. Ow, Heath D. Skinner, Vlad C. Sandulache

published 21 Apr 2025

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mRNA extracted from frozen buffy coat samples stored long term in tubes with no RNA preservative shows promise for downstream sequencing analyses

Erik Bovinder Ylitalo, Linda Vidman, Sophia Harlid, Bethany Van Guelpen

published 19 Mar 2025

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Identification of novel antiviral host factors by functional gene expression analysis using in vitro HBV infection assay systems

Takuto Nosaka, Tatsushi Naito, Yu Akazawa, Kazuto Takahashi, Hidetaka Matsuda, Masahiro Ohtani, Tsutomu Nishizawa, Hiroaki Okamoto, Yasunari Nakamoto

published 06 Mar 2025

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Computational analysis of the effect of a binding protein (RbpA) on the dynamics of Mycobacterium tuberculosis RNA polymerase assembly

Sneha Bheemireddy, Ramanathan Sowdhamini, Narayanaswamy Srinivasan

published 30 Jan 2025

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Bictegravir/emtricitabine/tenofovir alafenamide (B/F/TAF) in treatment-naïve and treatment-experienced people with HIV: 12-month virologic effectiveness and safety outcomes in the BICSTaR Japan cohort

Yoshiyuki Yokomaku, Katsuji Teruya, Dai Watanabe, Tomoyuki Endo, Rumi Minami, Nao Taguchi, Tali Cassidy, Andrea Marongiu, David Thorpe, Takuma Shirasaka, Shinichi Oka

published 08 Jan 2025

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The MIR-NAT MAPT-AS1 does not regulate Tau expression in human neurons

Rafaela Policarpo, Leen Wolfs, Saul Martínez-Montero, Lina Vandermeulen, Ines Royaux, Gert Van Peer, Pieter Mestdagh, Bart De Strooper, Annerieke Sierksma, Constantin d’Ydewalle

published 06 Jan 2025

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Clonal phylogenies inferred from bulk, single cell, and spatial transcriptomic analysis of epithelial cancers

Andrew Erickson, Sandy Figiel, Timothy Rajakumar, Srinivasa Rao, Wencheng Yin, Dimitrios Doultsinos, Anette Magnussen, Reema Singh, Ninu Poulose, Richard J. Bryant, Olivier Cussenot, Freddie C. Hamdy, Dan Woodcock, Ian G. Mills, Alastair D. Lamb

published 03 Jan 2025

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Assessment of salivary microRNA by RT-qPCR: Facing challenges in data interpretation for clinical diagnosis

Marc Van Der Hofstadt, Anna Cardinal, Morgane Lepeltier, Jérémy Boulestreau, Alimata Ouedraogo, Malik Kahli, Pierre Champigneux, Laurence Molina, Franck Molina, Thi Nhu Ngoc Van

published 10 Dec 2024

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RNA quality and protamine gene expression after storage of mouse testes under different conditions

Nerea Latorre, Beatriz A. Dorda, Isabel Rey, Eduardo R. S. Roldan, Ana Sanchez-Rodriguez

published 21 Nov 2024

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SARS-CoV-2 surveillance in US wastewater: Leading indicators and data variability analysis in 2023–2024

Hannes Schenk, Wolfgang Rauch, Alessandro Zulli, Alexandria B. Boehm

published 18 Nov 2024

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An investigation of plasma cell-free RNA for the detection of colorectal cancer: From transcriptome marker selection to targeted validation

Emmalee J. Northrop-Albrecht, Chung Wah Wu, Calise K. Berger, William R. Taylor, Patrick H. Foote, Karen A. Doering, Anna M. Gonser, Aditya Bhagwate, Zhifu Sun, Douglas W. Mahoney, Kelli N. Burger, Lisa A. Boardman, John B. Kisiel

published 15 Aug 2024

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Platelet-derived microvesicles isolated from type-2 diabetes mellitus patients harbour an altered miRNA signature and drive MDA-MB-231 triple-negative breast cancer cell invasion

Anca Tutuianu, Chinedu A. Anene, Mikayla Shelton, Valerie Speirs, Donald C. Whitelaw, Joanne Thorpe, Wayne Roberts, James R. Boyne

published 20 Jun 2024

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