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Non-coding RNA

STmiR: A Novel XGBoost-based framework for spatially resolved miRNA activity prediction in cancer transcriptomics

Jiaqi Yuan, Peng Xu, Zheng Ye, Wenbin Liu

published 09 Sep 2025

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Validation of plasma microRNAs as biomarkers in sepsis associated acute kidney injury upon first clinical presentation reveals limited diagnostic and prognostic performance

Tamar J. van der Aart, Matthijs Luxen, Jacqueline Koeze, Marco van Londen, Matthias Hackl, Jan C. ter Maaten, Matijs van Meurs, Hjalmar R. Bouma, on behalf of the the Acutelines research group

published 04 Sep 2025

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The MCTOT app: A publicly available tool for statistical cycle-to-threshold analysis and inference of informative but uncertainly determined qPCR data

Wei Zhuang, Jessica Liu

published 02 Sep 2025

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Transcriptomic changes associated with infection of Nicotiana benthamiana plants with tomato ringspot virus (genus Nepovirus) during the acute symptomatic stage and after symptom recovery

Dinesh Babu Paudel, Ana Priscilla Montenegro Alonso, Joan Chisholm, Huogen Xiao, Hélène Sanfaçon

published 02 Sep 2025

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Deciphering the role of the lncRNA TRIBAL in hepatocyte models

Sébastien Soubeyrand, Paulina Lau, Ruth McPherson

published 02 Sep 2025

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Exosomal miRNA expression profiling in patients with imatinib resistant Chronic myeloid leukemia: A pilot study

Raphatphorn Navakanitworakul, Pirun Saelue, Tipparat Penglong, Piyatida Molika, Natakorn Nokchan, Natta Tansila, Hansuk Buncherd, Supinya Thanapongpichat, Kanitta Srinoun

published 29 Aug 2025

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Genome-wide identification and functional characterization of magnesium transporter (MGT) gene family in soybean (Glycine max L.) and their expression profiles in response to aphid infestation, dehydration, and salt stresses

Nasrin Akter, Md Shohel Ul Islam, Fatema Tuz Zohra, Raihan Ur Rahman Ratno, Md. Shahedur Rahman, Shaikh Mizanur Rahman, Md. Abdur Rauf Sarkar

published 29 Aug 2025

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TGFBR1 gene silencing attenuates cardiomyopathy in the HFpEF mouse model

Xuanyang Shen, Weidong Li, Xiaolu Jiang, Hongfu Wen, Yuan Shen, Wen Zhang, Yongjian Peng, Guoping Kang

published 29 Aug 2025

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Piezo1 regulates autophagy in HT22 hippocampal neurons through the Ca²⁺/Calpain and Calcineurin/TFEB signaling pathways

Yatong Wu, Yan Lu, Hao Zhang, Suhe Dong, Ziqing Zhang, Sinian Wang, Fengsheng Li, Shimin Yin

published 26 Aug 2025

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Microbial diversity in drug-naïve Parkinson’s disease patients

Eliša Papić, Valentino Rački, Mario Hero, Ana Nyasha Zimani, Mojca Čižek Sajko, Gloria Rožmarić, Nada Starčević Čizmarević, Saša Ostojić, Miljenko Kapović, Goran Hauser, Aleš Maver, Borut Peterlin, Anja Kovanda, Vladimira Vuletić

published 18 Aug 2025

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Integrated gene network analysis and experimental validation identify key hub genes in potato response to Potato Virus Y infection

Roya Karimipour, Davoud Koolivand, Abozar Ghorbani, Masoud Naderpour, Mahsa Rostami

published 14 Aug 2025

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RPIPLM: Prediction of ncRNA-protein interaction by post-training a dual-tower pretrained biological model with supervised contrastive learning

Yiwei Liu, Ting Bao, Peng Yin, Shumin Wang, Yanbin Wang

published 14 Aug 2025

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Stabilized and unstabilized sampling methods result in differential fecal 16S rRNA microbial sequencing results

Christopher E. Stamper, Andrew J. Hoisington, Joseph C. Ellis, Christopher A. Lowry, Lisa A. Brenner

published 13 Aug 2025

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