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Next-generation sequencing

Evaluating the Fidelity of De Novo Short Read Metagenomic Assembly Using Simulated Data

Miguel Pignatelli, Andrés Moya

Comparison of Sequence Reads Obtained from Three Next-Generation Sequencing Platforms

Shingo Suzuki, Naoaki Ono, [ ... ], Tetsuya Yomo

Targeted Assembly of Short Sequence Reads

René L. Warren, Robert A. Holt

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

Mehrdad Hajibabaei, Shadi Shokralla, [ ... ], Donald J. Baird

Assessing Matched Normal and Tumor Pairs in Next-Generation Sequencing Studies

Liang Goh, Geng Bo Chen, [ ... ], Patrick Tan

A Practical Comparison of De Novo Genome Assembly Software Tools for Next-Generation Sequencing Technologies

Wenyu Zhang, Jiajia Chen, [ ... ], Bairong Shen

Decoding a Substantial Set of Samples in Parallel by Massive Sequencing

Mårten Neiman, Sverker Lundin, Peter Savolainen, Afshin Ahmadian

Systematic Evaluation of Three microRNA Profiling Platforms: Microarray, Beads Array, and Quantitative Real-Time PCR Array

Bin Wang, Paul Howel, [ ... ], Yaguang Xi

Detection and Removal of Biases in the Analysis of Next-Generation Sequencing Reads

Schraga Schwartz, Ram Oren, Gil Ast

Large Scale Loss of Data in Low-Diversity Illumina Sequencing Libraries Can Be Recovered by Deferred Cluster Calling

Felix Krueger, Simon R. Andrews, Cameron S. Osborne

Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing

Sebastian Jaenicke, Christina Ander, [ ... ], Alexander Goesmann

PoolHap: Inferring Haplotype Frequencies from Pooled Samples by Next Generation Sequencing

Quan Long, Daniel C. Jeffares, [ ... ], Magnus Nordborg

Mutation Detection with Next-Generation Resequencing through a Mediator Genome

Omri Wurtzel, Mally Dori-Bachash, [ ... ], Rotem Sorek

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