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Natural language processing

A Multistage Gene Normalization System Integrating Multiple Effective Methods

Lishuang Li, Shanshan Liu, [ ... ], Huiwei Zhou

Learning to Recognize Phenotype Candidates in the Auto-Immune Literature Using SVM Re-Ranking

Nigel Collier, Mai-vu Tran, [ ... ], Dietrich Rebholz-Schuhmann

Metaphor Interpretation Using Paraphrases Extracted from the Web

Danushka Bollegala, Ekaterina Shutova

Feasibility of Using Clinical Element Models (CEM) to Standardize Phenotype Variables in the Database of Genotypes and Phenotypes (dbGaP)

Ko-Wei Lin, Melissa Tharp, [ ... ], Hyeon-Eui Kim

Evaluation of Smoking Status Identification Using Electronic Health Records and Open-Text Information in a Large Mental Health Case Register

Chia-Yi Wu, Chin-Kuo Chang, [ ... ], Robert Stewart

Has Large-Scale Named-Entity Network Analysis Been Resting on a Flawed Assumption?

Brent D. Fegley, Vetle I. Torvik

The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text

Evangelos Pafilis, Sune P. Frankild, [ ... ], Lars Juhl Jensen

Enhancement of Chemical Entity Identification in Text Using Semantic Similarity Validation

Tiago Grego, Francisco M. Couto

Phylomemetic Patterns in Science Evolution—The Rise and Fall of Scientific Fields

David Chavalarias, Jean-Philippe Cointet

Signalling Network Construction for Modelling Plant Defence Response

Dragana Miljkovic, Tjaša Stare, [ ... ], Kristina Gruden

Integrating Various Resources for Gene Name Normalization

Yuncui Hu, Yanpeng Li, [ ... ], Liangxi Cheng

Combined SVM-CRFs for Biological Named Entity Recognition with Maximal Bidirectional Squeezing

Fei Zhu, Bairong Shen

Using Workflows to Explore and Optimise Named Entity Recognition for Chemistry

BalaKrishna Kolluru, Lezan Hawizy, [ ... ], Sophia Ananiadou

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