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Natural language processing

Determinants of Smoking and Quitting in HIV-Infected Individuals

Susan Regan, James B. Meigs, Steven K. Grinspoon, Virginia A. Triant

Bio-SCoRes: A Smorgasbord Architecture for Coreference Resolution in Biomedical Text

Halil Kilicoglu, Dina Demner-Fushman

Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature

Ibrahim Burak Ozyurt, Jeffrey S. Grethe, Maryann E. Martone, Anita E. Bandrowski

Methods to Develop an Electronic Medical Record Phenotype Algorithm to Compare the Risk of Coronary Artery Disease across 3 Chronic Disease Cohorts

Katherine P. Liao, Ashwin N. Ananthakrishnan, [ ... ], Tianxi Cai

Data-Driven Information Extraction from Chinese Electronic Medical Records

Dong Xu, Meizhuo Zhang, [ ... ], Kenny Q. Zhu

Identification of Adverse Drug Events from Free Text Electronic Patient Records and Information in a Large Mental Health Case Register

Ehtesham Iqbal, Robbie Mallah, [ ... ], Richard J. B. Dobson

pGenN, a Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature

Ruoyao Ding, Cecilia N. Arighi, [ ... ], K. Vijay-Shanker

Assessing the Impact of Case Sensitivity and Term Information Gain on Biomedical Concept Recognition

Tudor Groza, Karin Verspoor

Generation of Silver Standard Concept Annotations from Biomedical Texts with Special Relevance to Phenotypes

Anika Oellrich, Nigel Collier, Damian Smedley, Tudor Groza

Using Information from the Electronic Health Record to Improve Measurement of Unemployment in Service Members and Veterans with mTBI and Post-Deployment Stress

Christina Dillahunt-Aspillaga, Dezon Finch, [ ... ], James A. McCart

A Machine Reading System for Assembling Synthetic Paleontological Databases

Shanan E. Peters, Ce Zhang, Miron Livny, Christopher Ré

Negation’s Not Solved: Generalizability Versus Optimizability in Clinical Natural Language Processing

Stephen Wu, Timothy Miller, [ ... ], Cheryl Clark

Anatomical Entity Recognition with a Hierarchical Framework Augmented by External Resources

Yan Xu, Ji Hua, [ ... ], Junichi Tsujii

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