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Natural language processing

Negation’s Not Solved: Generalizability Versus Optimizability in Clinical Natural Language Processing

Stephen Wu, Timothy Miller, James Masanz, Matt Coarr, Scott Halgrim, David Carrell, Cheryl Clark

published 13 Nov 2014

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Anatomical Entity Recognition with a Hierarchical Framework Augmented by External Resources

Yan Xu, Ji Hua, Zhaoheng Ni, Qinlang Chen, Yubo Fan, Sophia Ananiadou, Eric I-Chao Chang, Junichi Tsujii

published 24 Oct 2014

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ClinicalTrials.gov as a Data Source for Semi-Automated Point-Of-Care Trial Eligibility Screening

Pascal B. Pfiffner, JiWon Oh, Timothy A. Miller, Kenneth D. Mandl

published 21 Oct 2014

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Facilitating Surveillance of Pulmonary Invasive Mold Diseases in Patients with Haematological Malignancies by Screening Computed Tomography Reports Using Natural Language Processing

Michelle R. Ananda-Rajah, David Martinez, Monica A. Slavin, Lawrence Cavedon, Michael Dooley, Allen Cheng, Karin A. Thursky

published 24 Sep 2014

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Predicting Co-Author Relationship in Medical Co-Authorship Networks

Qi Yu, Chao Long, Yanhua Lv, Hongfang Shao, Peifeng He, Zhiguang Duan

published 03 Jul 2014

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Automatic Extraction of Nanoparticle Properties Using Natural Language Processing: NanoSifter an Application to Acquire PAMAM Dendrimer Properties

David E. Jones, Sean Igo, John Hurdle, Julio C. Facelli

published 02 Jan 2014

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A Multistage Gene Normalization System Integrating Multiple Effective Methods

Lishuang Li, Shanshan Liu, Lihua Li, Wenting Fan, Degen Huang, Huiwei Zhou

published 12 Dec 2013

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Learning to Recognize Phenotype Candidates in the Auto-Immune Literature Using SVM Re-Ranking

Nigel Collier, Mai-vu Tran, Hoang-quynh Le, Quang-Thuy Ha, Anika Oellrich, Dietrich Rebholz-Schuhmann

published 14 Oct 2013

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Metaphor Interpretation Using Paraphrases Extracted from the Web

Danushka Bollegala, Ekaterina Shutova

published 20 Sep 2013

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Feasibility of Using Clinical Element Models (CEM) to Standardize Phenotype Variables in the Database of Genotypes and Phenotypes (dbGaP)

Ko-Wei Lin, Melissa Tharp, Mike Conway, Alexander Hsieh, Mindy Ross, Jihoon Kim, Hyeon-Eui Kim

published 18 Sep 2013

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Evaluation of Smoking Status Identification Using Electronic Health Records and Open-Text Information in a Large Mental Health Case Register

Chia-Yi Wu, Chin-Kuo Chang, Debbie Robson, Richard Jackson, Shaw-Ji Chen, Richard D. Hayes, Robert Stewart

published 12 Sep 2013

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Has Large-Scale Named-Entity Network Analysis Been Resting on a Flawed Assumption?

Brent D. Fegley, Vetle I. Torvik

published 24 Jul 2013

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The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text

Evangelos Pafilis, Sune P. Frankild, Lucia Fanini, Sarah Faulwetter, Christina Pavloudi, Aikaterini Vasileiadou, Christos Arvanitidis, Lars Juhl Jensen

published 18 Jun 2013

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