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Named entity recognition

Extracting microRNA-gene relations from biomedical literature using distant supervision

Andre Lamurias, Luka A. Clarke, Francisco M. Couto

The Global Burden of Journal Peer Review in the Biomedical Literature: Strong Imbalance in the Collective Enterprise

Michail Kovanis, Raphaël Porcher, Philippe Ravaud, Ludovic Trinquart

Author Disambiguation in PubMed: Evidence on the Precision and Recall of Author-ity among NIH-Funded Scientists

Marc J. Lerchenmueller, Olav Sorenson

Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature

Ibrahim Burak Ozyurt, Jeffrey S. Grethe, Maryann E. Martone, Anita E. Bandrowski

pGenN, a Gene Normalization Tool for Plant Genes and Proteins in Scientific Literature

Ruoyao Ding, Cecilia N. Arighi, [ ... ], K. Vijay-Shanker

Predicting Co-Author Relationship in Medical Co-Authorship Networks

Qi Yu, Chao Long, [ ... ], Zhiguang Duan

A Multistage Gene Normalization System Integrating Multiple Effective Methods

Lishuang Li, Shanshan Liu, [ ... ], Huiwei Zhou

Learning to Recognize Phenotype Candidates in the Auto-Immune Literature Using SVM Re-Ranking

Nigel Collier, Mai-vu Tran, [ ... ], Dietrich Rebholz-Schuhmann

Has Large-Scale Named-Entity Network Analysis Been Resting on a Flawed Assumption?

Brent D. Fegley, Vetle I. Torvik

The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text

Evangelos Pafilis, Sune P. Frankild, [ ... ], Lars Juhl Jensen

Enhancement of Chemical Entity Identification in Text Using Semantic Similarity Validation

Tiago Grego, Francisco M. Couto

Integrating Various Resources for Gene Name Normalization

Yuncui Hu, Yanpeng Li, [ ... ], Liangxi Cheng

Combined SVM-CRFs for Biological Named Entity Recognition with Maximal Bidirectional Squeezing

Fei Zhu, Bairong Shen

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