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Mutation detection

Comparison of different sequencing techniques for identification of SARS-CoV-2 variants of concern with multiplex real-time PCR

Diyanath Ranasinghe, Tibutius Thanesh Pramanayagam Jayadas, Deshni Jayathilaka, Chandima Jeewandara, Osanda Dissanayake, Dinuka Guruge, Dinuka Ariyaratne, Dumni Gunasinghe, Laksiri Gomes, Ayesha Wijesinghe, Ruwan Wijayamuni, Gathsaurie Neelika Malavige

published 04 Apr 2022

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Profiling RT-LAMP tolerance of sequence variation for SARS-CoV-2 RNA detection

Esta Tamanaha, Yinhua Zhang, Nathan A. Tanner

published 24 Mar 2022

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Utilisation of semiconductor sequencing for the detection of predictive biomarkers in glioblastoma

Gareth Williams, Alexander Llewelyn, Robert Thatcher, Keeda-Marie Hardisty, Marco Loddo

published 24 Mar 2022

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Detection of SARS-CoV-2 and the L452R spike mutation using reverse transcription loop-mediated isothermal amplification plus bioluminescent assay in real-time (RT-LAMP-BART)

Takahiro Iijima, Shinnosuke Ando, Dai Kanamori, Kazumichi Kuroda, Tsutomu Nomura, Laurence Tisi, Paul E. Kilgore, Neil Percy, Hikaru Kohase, Satoshi Hayakawa, Mitsuko Seki, Tomonori Hoshino

published 21 Mar 2022

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Molecular profiling of the artemisinin resistance Kelch 13 gene in Plasmodium falciparum from Nigeria

Fehintola V. Ajogbasile, Paul E. Oluniyi, Adeyemi T. Kayode, Kazeem O. Akano, Benjamin B. Adegboyega, Courage Philip, Nnenna Ogbulafor, Henrietta U. Okafor, Stephen Oguche, Robinson D. Wammanda, Olugbenga A. Mokuolu, Onikepe A. Folarin, Christian T. Happi

published 28 Feb 2022

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Detection of EGFR mutations in non-small cell lung cancer by droplet digital PCR

Drew F. K. Williamson, Sean R. N. Marris, Vanesa Rojas-Rudilla, Jacqueline L. Bruce, Cloud P. Paweletz, Geoffrey R. Oxnard, Lynette M. Sholl, Fei Dong

published 24 Feb 2022

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Forecasting emergence of COVID-19 variants of concern

James Kyle Miller, Kimberly Elenberg, Artur Dubrawski

published 24 Feb 2022

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Cell-free tumor DNA, CA125 and HE4 for the objective assessment of tumor burden in patients with advanced high-grade serous ovarian cancer

Florian Heitz, Sotirios Lakis, Philipp Harter, Sebastian Heikaus, Jalid Sehouli, Jatin Talwar, Roopika Menon, Beyhan Ataseven, Miriam Bertrand, Stephanie Schneider, Erika Mariotti, Mareike Bommert, Judith N. Müller, Sonia Prader, Frauke Leenders, Alexandra Hengsbach, Christian Gloeckner, Elena Ioana Braicu, Lukas C. Heukamp, Andreas du Bois, Johannes M. Heuckmann

published 07 Feb 2022

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Linking protein structural and functional change to mutation using amino acid networks

Cristina Sotomayor-Vivas, Enrique Hernández-Lemus, Rodrigo Dorantes-Gilardi

published 21 Jan 2022

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Limits to detecting epistasis in the fitness landscape of HIV

Avik Biswas, Allan Haldane, Ronald M. Levy

published 18 Jan 2022

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A short plus long-amplicon based sequencing approach improves genomic coverage and variant detection in the SARS-CoV-2 genome

Carlos Arana, Chaoying Liang, Matthew Brock, Bo Zhang, Jinchun Zhou, Li Chen, Brandi Cantarel, Jeffrey SoRelle, Lora V. Hooper, Prithvi Raj

published 13 Jan 2022

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Neonicotinoid’s resistance monitoring, diagnostic mechanisms and cytochrome P450 expression in green peach aphid [Myzus persicae (Sulzer) (Hemiptera: Aphididae)]

Muhammad Umair Sial, Khalid Mehmood, Shafqat Saeed, Mureed Husain, Khawaja Ghulam Rasool, Abdulrahman Saad Aldawood

published 12 Jan 2022

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Equivalence of the GeneXpert System and GeneXpert Omni System for tuberculosis and rifampicin resistance detection

Sophia B. Georghiou, Riccardo Alagna, Daniela M. Cirillo, Sergio Carmona, Morten Ruhwald, Samuel G. Schumacher

published 17 Dec 2021

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