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Multiple alignment calculation

SeqFeatR for the Discovery of Feature-Sequence Associations

Bettina Budeus, Jörg Timm, Daniel Hoffmann

published 05 Jan 2016

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New Type of Papillomavirus and Novel Circular Single Stranded DNA Virus Discovered in Urban Rattus norvegicus Using Circular DNA Enrichment and Metagenomics

Thomas Arn Hansen, Helena Fridholm, Tobias Guldberg Frøslev, Kristín Rós Kjartansdóttir, Eske Willerslev, Lars Peter Nielsen, Anders Johannes Hansen

published 11 Nov 2015

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Global Transcriptome Analysis of the Tentacle of the Jellyfish Cyanea capillata Using Deep Sequencing and Expressed Sequence Tags: Insight into the Toxin- and Degenerative Disease-Related Transcripts

Guoyan Liu, Yonghong Zhou, Dan Liu, Qianqian Wang, Zengliang Ruan, Qian He, Liming Zhang

published 09 Nov 2015

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RNA 3D Modules in Genome-Wide Predictions of RNA 2D Structure

Corinna Theis, Craig L. Zirbel, Christian Höner zu Siederdissen, Christian Anthon, Ivo L. Hofacker, Henrik Nielsen, Jan Gorodkin

published 28 Oct 2015

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Handling Permutation in Sequence Comparison: Genome-Wide Enhancer Prediction in Vertebrates by a Novel Non-Linear Alignment Scoring Principle

Dirk Dolle, Juan L. Mateo, Michael P. Eichenlaub, Rebecca Sinn, Robert Reinhardt, Burkhard Höckendorf, Daigo Inoue, Lazaro Centanin, Laurence Ettwiller, Joachim Wittbrodt

published 27 Oct 2015

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CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact Area

Genki Terashi, Mayuko Takeda-Shitaka

published 26 Oct 2015

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The LysE Superfamily of Transport Proteins Involved in Cell Physiology and Pathogenesis

Brian V. Tsu, Milton H. Saier Jr

published 16 Oct 2015

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ExScalibur: A High-Performance Cloud-Enabled Suite for Whole Exome Germline and Somatic Mutation Identification

Riyue Bao, Kyle Hernandez, Lei Huang, Wenjun Kang, Elizabeth Bartom, Kenan Onel, Samuel Volchenboum, Jorge Andrade

published 13 Aug 2015

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Phylogeny of Echinoderm Hemoglobins

Ana B. Christensen, Joseph L. Herman, Maurice R. Elphick, Kord M. Kober, Daniel Janies, Gregorio Linchangco, Dean C. Semmens, Xavier Bailly, Serge N. Vinogradov, David Hoogewijs

published 06 Aug 2015

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Selection of Orthologous Genes for Construction of a Highly Resolved Phylogenetic Tree and Clarification of the Phylogeny of Trichosporonales Species

Masako Takashima, Ri-ichiroh Manabe, Wataru Iwasaki, Akira Ohyama, Moriya Ohkuma, Takashi Sugita

published 04 Aug 2015

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Genomic Resources for Water Yam (Dioscorea alata L.): Analyses of EST-Sequences, De Novo Sequencing and GBS Libraries

Christopher A. Saski, Ranjana Bhattacharjee, Brian E. Scheffler, Robert Asiedu

published 29 Jul 2015

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N-Terminal Coiled-Coil Structure of ATPase Subunits of 26S Proteasome Is Crucial for Proteasome Function

Tomonao Inobe, Reiko Genmei

published 24 Jul 2015

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Exploring Dance Movement Data Using Sequence Alignment Methods

Seyed Hossein Chavoshi, Bernard De Baets, Tijs Neutens, Guy De Tré, Nico Van de Weghe

published 16 Jul 2015

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