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Molecular evolution

Patterns of Genome Evolution among the Microsporidian Parasites Encephalitozoon cuniculi, Antonospora locustae and Enterocytozoon bieneusi

Nicolas Corradi, Donna E. Akiyoshi, [ ... ], Patrick J. Keeling

The Gene Transformer of Anastrepha Fruit Flies (Diptera, Tephritidae) and Its Evolution in Insects

María Fernanda Ruiz, Andreina Milano, [ ... ], Lucas Sánchez

Rampant Adaptive Evolution in Regions of Proteins with Unknown Function in Drosophila simulans

Alisha K. Holloway, David J. Begun

Ancestral Inference and the Study of Codon Bias Evolution: Implications for Molecular Evolutionary Analyses of the Drosophila melanogaster Subgroup

Hiroshi Akashi, Piyush Goel, Anoop John

The Origins of Novel Protein Interactions during Animal Opsin Evolution

David C. Plachetzki, Bernard M. Degnan, Todd H. Oakley

Adaptive Evolution of a Stress Response Protein

Tom J. Little, Lenny Nelson, Ted Hupp

SLiMFinder: A Probabilistic Method for Identifying Over-Represented, Convergently Evolved, Short Linear Motifs in Proteins

Richard J. Edwards, Norman E. Davey, Denis C. Shields

Genome Dynamics of Short Oligonucleotides: The Example of Bacterial DNA Uptake Enhancing Sequences

Mohammed Bakkali

Molecular Evolution and Functional Divergence of the Ca²⁺ Sensor Protein in Store-operated Ca²⁺ Entry: Stromal Interaction Molecule

Xinjiang Cai

HIV-Specific Probabilistic Models of Protein Evolution

David C. Nickle, Laura Heath, [ ... ], Sergei L. Kosakovsky Pond

A Database of Wing Diversity in the Hawaiian Drosophila

Kevin A. Edwards, Linden T. Doescher, Kenneth Y. Kaneshiro, Daisuke Yamamoto

Structural Insights into the Evolution of a Non-Biological Protein: Importance of Surface Residues in Protein Fold Optimization

Matthew D. Smith, Matthew A. Rosenow, [ ... ], John C. Chaput

Comparative Population Genetics of the Immunity Gene, Relish: Is Adaptive Evolution Idiosyncratic?

Mia T. Levine, David J. Begun

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