Advertisement

Browse Subject Areas

?

Click through the PLOS taxonomy to find articles in your field.

For more information about PLOS Subject Areas, click here.

Molecular dynamics

Position of the Third Na⁺ Site in the Aspartate Transporter Glt_Ph and the Human Glutamate Transporter, EAAT1

Turgut Bastug, Germano Heinzelmann, Serdar Kuyucak, Marietta Salim, Robert J. Vandenberg, Renae M. Ryan

published 13 Mar 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Structure-Based High-Throughput Epitope Analysis of Hexon Proteins in B and C Species Human Adenoviruses (HAdVs)

Xiao-Hui Yuan, Ying-Chen Wang, Wen-Jing Jin, Bin-Bin Zhao, Cai-Feng Chen, Jian Yang, Jing-Fei Wang, Ying-Ying Guo, Jing-Jun Liu, Ding Zhang, Lu-Lu Gong, You-Wen He

published 13 Mar 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Interaction Pattern of Arg 62 in the A-Pocket of Differentially Disease-Associated HLA-B27 Subtypes Suggests Distinct TCR Binding Modes

Elisa Nurzia, Daniele Narzi, Alberto Cauli, Alessandro Mathieu, Valentina Tedeschi, Silvana Caristi, Rosa Sorrentino, Rainer A. Böckmann, Maria Teresa Fiorillo

published 05 Mar 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Rapid and Accurate Prediction and Scoring of Water Molecules in Protein Binding Sites

Gregory A. Ross, Garrett M. Morris, Philip C. Biggin

published 01 Mar 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Mechanisms of Loss of Functions of Human Angiogenin Variants Implicated in Amyotrophic Lateral Sclerosis

Aditya K. Padhi, Hirdesh Kumar, Suhas V. Vasaikar, Bhyravabhotla Jayaram, James Gomes

published 27 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Investigating the Structural Impacts of I64T and P311S Mutations in APE1-DNA Complex: A Molecular Dynamics Approach

C. George Priya Doss, N. NagaSundaram

published 27 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Systematic Validation of Protein Force Fields against Experimental Data

Kresten Lindorff-Larsen, Paul Maragakis, Stefano Piana, Michael P. Eastwood, Ron O. Dror, David E. Shaw

published 22 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Carbinolamine Formation and Dehydration in a DNA Repair Enzyme Active Site

M. L. Dodson, Ross C. Walker, R. Stephen Lloyd

published 22 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

The Presence of the Iron-Sulfur Motif Is Important for the Conformational Stability of the Antiviral Protein, Viperin

Shubhasis Haldar, Simantasarani Paul, Nidhi Joshi, Anindya Dasgupta, Krishnananda Chattopadhyay

published 21 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Discovery of Intramolecular Signal Transduction Network Based on a New Protein Dynamics Model of Energy Dissipation

Cheng-Wei Ma, Zhi-Long Xiu, An-Ping Zeng

published 20 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Structure-Based Rational Design of a Toll-like Receptor 4 (TLR4) Decoy Receptor with High Binding Affinity for a Target Protein

Jieun Han, Hyun Jung Kim, Sang-Chul Lee, Seungpyo Hong, Keunwan Park, Young Ho Jeon, Dongsup Kim, Hae-Kap Cheong, Hak-Sung Kim

published 17 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Cupricyclins, Novel Redox-Active Metallopeptides Based on Conotoxins Scaffold

Marco Barba, Anatoli P. Sobolev, Veranika Zobnina, Maria Carmela Bonaccorsi di Patti, Laura Cervoni, Maria Carolina Spiezia, M. Eugenia Schininà, Donatella Pietraforte, Luisa Mannina, Giovanni Musci, Fabio Polticelli

published 03 Feb 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Effects of Ligands on Unfolding of the Amyloid β-Peptide Central Helix: Mechanistic Insights from Molecular Dynamics Simulations

Mika Ito, Jan Johansson, Roger Strömberg, Lennart Nilsson

published 23 Jan 2012

Loading metrics information...

Metrics unavailable. Please check back later.

Advertisement

Create a weekly email alert for: Molecular dynamics

You can change these options by clicking profile then "Alerts and Notifications"