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Microbial taxonomy

Metagenomic Profiling of a Microbial Assemblage Associated with the California Mussel: A Node in Networks of Carbon and Nitrogen Cycling

Catherine A. Pfister, Folker Meyer, Dionysios A. Antonopoulos

Random Whole Metagenomic Sequencing for Forensic Discrimination of Soils

Anastasia S. Khodakova, Renee J. Smith, [ ... ], Adrian Linacre

Statistical Object Data Analysis of Taxonomic Trees from Human Microbiome Data

Patricio S. La Rosa, Berkley Shands, [ ... ], William D. Shannon

Vikodak - A Modular Framework for Inferring Functional Potential of Microbial Communities from 16S Metagenomic Datasets

Sunil Nagpal, Mohammed Monzoorul Haque, Sharmila S. Mande

WGSQuikr: Fast Whole-Genome Shotgun Metagenomic Classification

David Koslicki, Simon Foucart, Gail Rosen

Exploring thematic structure and predicted functionality of 16S rRNA amplicon data

Stephen Woloszynek, Joshua Chang Mell, [ ... ], Gail L. Rosen

Screening human cell lines for viral infections applying RNA-Seq data analysis

Cord C. Uphoff, Claudia Pommerenke, Sabine A. Denkmann, Hans G. Drexler

Optimizing Viral Discovery in Bats

Cristin C. W. Young, Kevin J. Olival

Two-Stage Clustering (TSC): A Pipeline for Selecting Operational Taxonomic Units for the High-Throughput Sequencing of PCR Amplicons

Xiao-Tao Jiang, Hai Zhang, [ ... ], Hong-Wei Zhou

Exploration of Noncoding Sequences in Metagenomes

Fabián Tobar-Tosse, Adrián C. Rodríguez, [ ... ], Pedro A. Moreno

Assessing Bacterial Diversity in the Rhizosphere of Thymus zygis Growing in the Sierra Nevada National Park (Spain) through Culture-Dependent and Independent Approaches

Javier Pascual, Silvia Blanco, [ ... ], Pieter van Dillewijn

Characterization of the intestinal microbiota of the sea cucumber Holothuria glaberrima

María Pagán-Jiménez, Jean F. Ruiz-Calderón, María G. Dominguez-Bello, José E. García-Arrarás

Cloacal Microbiome Structure in a Long-Distance Migratory Bird Assessed Using Deep 16sRNA Pyrosequencing

Jakub Kreisinger, Dagmar Čížková, Lucie Kropáčková, Tomáš Albrecht

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