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Microbial taxonomy

Microbial Diversity in the Midguts of Field and Lab-Reared Populations of the European Corn Borer Ostrinia nubilalis

Eugeni Belda, Laia Pedrola, Juli Peretó, Juan F. Martínez-Blanch, Arnau Montagud, Emilio Navarro, Javier Urchueguía, Daniel Ramón, Andrés Moya, Manuel Porcar

published 30 Jun 2011

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CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, Noah D. Firestone, Erin L. Gross, James M. DiFranco, Jori H. Hardman, Bastienne Vriesendorp, Russell A. Faust, Daniel A. Janies, Eugene J. Leys

published 22 Apr 2011

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Core Gene Set As the Basis of Multilocus Sequence Analysis of the Subclass Actinobacteridae

Toïdi Adékambi, Ray W. Butler, Finnian Hanrahan, Arthur L. Delcher, Michel Drancourt, Thomas M. Shinnick

published 31 Mar 2011

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Evolution of Bacterial Phosphoglycerate Mutases: Non-Homologous Isofunctional Enzymes Undergoing Gene Losses, Gains and Lateral Transfers

Jeremy M. Foster, Paul J. Davis, Sylvine Raverdy, Marion H. Sibley, Elisabeth A. Raleigh, Sanjay Kumar, Clotilde K. S. Carlow

published 26 Oct 2010

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Metagenomic Profiling of a Microbial Assemblage Associated with the California Mussel: A Node in Networks of Carbon and Nitrogen Cycling

Catherine A. Pfister, Folker Meyer, Dionysios A. Antonopoulos

published 06 May 2010

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Pyrosequencing of Mytilus galloprovincialis cDNAs: Tissue-Specific Expression Patterns

John A. Craft, Jack A. Gilbert, Ben Temperton, Kate E. Dempsey, Kevin Ashelford, Bela Tiwari, Tom H. Hutchinson, J. Kevin Chipman

published 25 Jan 2010

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Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

Marcus J. Claesson, Orla O'Sullivan, Qiong Wang, Janne Nikkilä, Julian R. Marchesi, Hauke Smidt, Willem M. de Vos, R. Paul Ross, Paul W. O'Toole

published 20 Aug 2009

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An Automated Phylogenetic Tree-Based Small Subunit rRNA Taxonomy and Alignment Pipeline (STAP)

Dongying Wu, Amber Hartman, Naomi Ward, Jonathan A. Eisen

published 02 Jul 2008

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Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome

Tim Urich, Anders Lanzén, Ji Qi, Daniel H. Huson, Christa Schleper, Stephan C. Schuster

published 25 Jun 2008

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Large-Scale Comparative Genomic Ranking of Taxonomically Restricted Genes (TRGs) in Bacterial and Archaeal Genomes

Gareth A. Wilson, Edward J. Feil, Andrew K. Lilley, Dawn Field

published 28 Mar 2007

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