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Microbial taxonomy

Calculating Orthologs in Bacteria and Archaea: A Divide and Conquer Approach

Mihail R. Halachev, Nicholas J. Loman, Mark J. Pallen

published 12 Dec 2011

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Microbial Biogeography of Public Restroom Surfaces

Gilberto E. Flores, Scott T. Bates, Dan Knights, Christian L. Lauber, Jesse Stombaugh, Rob Knight, Noah Fierer

published 23 Nov 2011

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Arctic Ocean Microbial Community Structure before and after the 2007 Record Sea Ice Minimum

André M. Comeau, William K. W. Li, Jean-Éric Tremblay, Eddy C. Carmack, Connie Lovejoy

published 09 Nov 2011

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Substrate Type Determines Metagenomic Profiles from Diverse Chemical Habitats

Thomas C. Jeffries, Justin R. Seymour, Jack A. Gilbert, Elizabeth A. Dinsdale, Kelly Newton, Sophie S. C. Leterme, Ben Roudnew, Renee J. Smith, Laurent Seuront, James G. Mitchell

published 23 Sep 2011

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Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems

Lucie Zinger, Linda A. Amaral-Zettler, Jed A. Fuhrman, M. Claire Horner-Devine, Susan M. Huse, David B. Mark Welch, Jennifer B. H. Martiny, Mitchell Sogin, Antje Boetius, Alban Ramette

published 08 Sep 2011

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The Phylogenetic Diversity of Metagenomes

Steven W. Kembel, Jonathan A. Eisen, Katherine S. Pollard, Jessica L. Green

published 31 Aug 2011

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Culture Enriched Molecular Profiling of the Cystic Fibrosis Airway Microbiome

Christopher D. Sibley, Margot E. Grinwis, Tyler R. Field, Christina S. Eshaghurshan, Monica M. Faria, Scot E. Dowd, Michael D. Parkins, Harvey R. Rabin, Michael G. Surette

published 28 Jul 2011

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Microbial Diversity in the Midguts of Field and Lab-Reared Populations of the European Corn Borer Ostrinia nubilalis

Eugeni Belda, Laia Pedrola, Juli Peretó, Juan F. Martínez-Blanch, Arnau Montagud, Emilio Navarro, Javier Urchueguía, Daniel Ramón, Andrés Moya, Manuel Porcar

published 30 Jun 2011

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CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, Noah D. Firestone, Erin L. Gross, James M. DiFranco, Jori H. Hardman, Bastienne Vriesendorp, Russell A. Faust, Daniel A. Janies, Eugene J. Leys

published 22 Apr 2011

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Core Gene Set As the Basis of Multilocus Sequence Analysis of the Subclass Actinobacteridae

Toïdi Adékambi, Ray W. Butler, Finnian Hanrahan, Arthur L. Delcher, Michel Drancourt, Thomas M. Shinnick

published 31 Mar 2011

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Evolution of Bacterial Phosphoglycerate Mutases: Non-Homologous Isofunctional Enzymes Undergoing Gene Losses, Gains and Lateral Transfers

Jeremy M. Foster, Paul J. Davis, Sylvine Raverdy, Marion H. Sibley, Elisabeth A. Raleigh, Sanjay Kumar, Clotilde K. S. Carlow

published 26 Oct 2010

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Metagenomic Profiling of a Microbial Assemblage Associated with the California Mussel: A Node in Networks of Carbon and Nitrogen Cycling

Catherine A. Pfister, Folker Meyer, Dionysios A. Antonopoulos

published 06 May 2010

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Pyrosequencing of Mytilus galloprovincialis cDNAs: Tissue-Specific Expression Patterns

John A. Craft, Jack A. Gilbert, Ben Temperton, Kate E. Dempsey, Kevin Ashelford, Bela Tiwari, Tom H. Hutchinson, J. Kevin Chipman

published 25 Jan 2010

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