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Microbial taxonomy

Predictive functional analysis reveals inferred features unique to cervicovaginal microbiota of African women with bacterial vaginosis and high-risk human papillomavirus infection

Harris Onywera, Joseph Anejo-Okopi, [ ... ], Anna-Lise Williamson

Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire

Taylor K. Dunivin, Justine Miller, Ashley Shade

Resolving Prokaryotic Taxonomy without rRNA: Longer Oligonucleotide Word Lengths Improve Genome and Metagenome Taxonomic Classification

Eric B. Alsop, Jason Raymond

Microbial community composition and diversity in the Indian Ocean deep sea REY-rich muds

Shuyan Wang, Miao Yu, [ ... ], Hao Chen

Metagenomic Survey for Viruses in Western Arctic Caribou, Alaska, through Iterative Assembly of Taxonomic Units

Anita C. Schürch, Debby Schipper, [ ... ], Saskia L. Smits

Adaptation of the infant gut microbiome during the complementary feeding transition

Starin McKeen, Nicole C. Roy, [ ... ], Warren C. McNabb

The intestinal virome in children with cystic fibrosis differs from healthy controls

Michael J. Coffey, Ivan Low, [ ... ], Chee Y. Ooi

NGS read classification using AI

Benjamin Voigt, Oliver Fischer, [ ... ], Piotr Wojciech Dabrowski

Putative Effect of Aquifer Recharge on the Abundance and Taxonomic Composition of Endemic Microbial Communities

Renee J. Smith, James S. Paterson, [ ... ], James G. Mitchell

Assessment of the microbial interplay during anaerobic co-digestion of wastewater sludge using common components analysis

Francesc Puig-Castellví, Laëtitia Cardona, [ ... ], Olivier Chapleur

Beneficial effect of consuming milk containing only A2 beta-casein on gut microbiota: A single-center, randomized, double-blind, cross-over study

Chin-Hee Song, Nayoung Kim, [ ... ], Dong Ho Lee

Suppression treatment differentially influences the microbial community and the occurrence of broad host range plasmids in the rhizosphere of the model cover crop Avena sativa L.

Marco Allegrini, Elena del V. Gomez, Kornelia Smalla, María Celina Zabaloy

Genomes from bacteria associated with the canine oral cavity: A test case for automated genome-based taxonomic assignment

David A. Coil, Guillaume Jospin, [ ... ], Ciaran O’Flynn

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