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Microbial taxonomy

SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation

Brejnev Muhizi Muhire, Arvind Varsani, Darren Patrick Martin

Metagenomic Survey for Viruses in Western Arctic Caribou, Alaska, through Iterative Assembly of Taxonomic Units

Anita C. Schürch, Debby Schipper, [ ... ], Saskia L. Smits

Profile Hidden Markov Models for the Detection of Viruses within Metagenomic Sequence Data

Peter Skewes-Cox, Thomas J. Sharpton, Katherine S. Pollard, Joseph L. DeRisi

Random Whole Metagenomic Sequencing for Forensic Discrimination of Soils

Anastasia S. Khodakova, Renee J. Smith, [ ... ], Adrian Linacre

Deep Illumina-Based Shotgun Sequencing Reveals Dietary Effects on the Structure and Function of the Fecal Microbiome of Growing Kittens

Oliver Deusch, Ciaran O’Flynn, [ ... ], Kelly S. Swanson

Main Functions and Taxonomic Distribution of Virulence Genes in Brucella melitensis 16 M

Aniel Jessica Leticia Brambila-Tapia, Dagoberto Armenta-Medina, Nancy Rivera-Gomez, Ernesto Perez-Rueda

The Bias Associated with Amplicon Sequencing Does Not Affect the Quantitative Assessment of Bacterial Community Dynamics

Federico M. Ibarbalz, María Victoria Pérez, Eva L. M. Figuerola, Leonardo Erijman

Gut Microbiomes of Indian Children of Varying Nutritional Status

Tarini Shankar Ghosh, Sourav Sen Gupta, [ ... ], G. Balakrish Nair

Systematic Design of 18S rRNA Gene Primers for Determining Eukaryotic Diversity in Microbial Consortia

Luisa W. Hugerth, Emilie E. L. Muller, [ ... ], Anders F. Andersson

Coal-Packed Methane Biofilter for Mitigation of Green House Gas Emissions from Coal Mine Ventilation Air

Hendy Limbri, Cindy Gunawan, [ ... ], Bettina Rosche

The Gut Microbial Community of Midas Cichlid Fish in Repeatedly Evolved Limnetic-Benthic Species Pairs

Paolo Franchini, Carmelo Fruciano, [ ... ], Axel Meyer

Analysis, Optimization and Verification of Illumina-Generated 16S rRNA Gene Amplicon Surveys

Michael C. Nelson, Hilary G. Morrison, [ ... ], Joerg Graf

Biochemical Properties of Ectoine Hydroxylases from Extremophiles and Their Wider Taxonomic Distribution among Microorganisms

Nils Widderich, Astrid Höppner, [ ... ], Erhard Bremer

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