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Microbial taxonomy

The Metagenome of Utricularia gibba's Traps: Into the Microbial Input to a Carnivorous Plant

Luis David Alcaraz, Shamayim Martínez-Sánchez, Ignacio Torres, Enrique Ibarra-Laclette, Luis Herrera-Estrella

published 09 Feb 2016

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Vikodak - A Modular Framework for Inferring Functional Potential of Microbial Communities from 16S Metagenomic Datasets

Sunil Nagpal, Mohammed Monzoorul Haque, Sharmila S. Mande

published 05 Feb 2016

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Comparing Apples and Oranges?: Next Generation Sequencing and Its Impact on Microbiome Analysis

Adam G. Clooney, Fiona Fouhy, Roy D. Sleator, Aisling O’ Driscoll, Catherine Stanton, Paul D. Cotter, Marcus J. Claesson

published 05 Feb 2016

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Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood

Vincent Hervé, Elodie Ketter, Jean-Claude Pierrat, Eric Gelhaye, Pascale Frey-Klett

published 29 Jan 2016

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Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria

Christina Bienhold, Lucie Zinger, Antje Boetius, Alban Ramette

published 27 Jan 2016

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Does Dark-Spot Syndrome Experimentally Transmit among Caribbean Corals?

Carly J. Randall, Adán G. Jordán-Garza, Erinn M. Muller, Robert van Woesik

published 20 Jan 2016

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Archaeal and Bacterial Communities Associated with the Surface Mucus of Caribbean Corals Differ in Their Degree of Host Specificity and Community Turnover Over Reefs

Pedro R. Frade, Katharina Roll, Kristin Bergauer, Gerhard J. Herndl

published 20 Jan 2016

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Functional Profiling of Unfamiliar Microbial Communities Using a Validated De Novo Assembly Metatranscriptome Pipeline

Mark Davids, Floor Hugenholtz, Vitor Martins dos Santos, Hauke Smidt, Michiel Kleerebezem, Peter J. Schaap

published 12 Jan 2016

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Linking the Composition of Bacterial and Archaeal Communities to Characteristics of Soil and Flora Composition in the Atlantic Rainforest

Julia Elidia Lima-Perim, Emiliana Manesco Romagnoli, Francisco Dini-Andreote, Ademir Durrer, Armando Cavalcante Franco Dias, Fernando Dini Andreote

published 11 Jan 2016

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Assessing Bacterial Diversity in the Rhizosphere of Thymus zygis Growing in the Sierra Nevada National Park (Spain) through Culture-Dependent and Independent Approaches

Javier Pascual, Silvia Blanco, Marina García-López, Adela García-Salamanca, Sergey A. Bursakov, Olga Genilloud, Gerald F. Bills, Juan L. Ramos, Pieter van Dillewijn

published 07 Jan 2016

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Relative Roles of Deterministic and Stochastic Processes in Driving the Vertical Distribution of Bacterial Communities in a Permafrost Core from the Qinghai-Tibet Plateau, China

Weigang Hu, Qi Zhang, Tian Tian, Dingyao Li, Gang Cheng, Jing Mu, Qingbai Wu, Fujun Niu, James C. Stegen, Lizhe An, Huyuan Feng

published 23 Dec 2015

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Antepartum Antibiotic Treatment Increases Offspring Susceptibility to Experimental Colitis: A Role of the Gut Microbiota

Peris Mumbi Munyaka, N. Eissa, Charles Noah Bernstein, Ehsan Khafipour, Jean-Eric Ghia

published 25 Nov 2015

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Methanosarcina Play an Important Role in Anaerobic Co-Digestion of the Seaweed Ulva lactuca: Taxonomy and Predicted Metabolism of Functional Microbial Communities

Jamie A. FitzGerald, Eoin Allen, David M. Wall, Stephen A. Jackson, Jerry D. Murphy, Alan D. W. Dobson

published 10 Nov 2015

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