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Microbial taxonomy

A confidence interval analysis of sampling effort, sequencing depth, and taxonomic resolution of fungal community ecology in the era of high-throughput sequencing

Ryoko Oono

Composition and variation of respiratory microbiota in healthy military personnel

Jun Hang, Nela Zavaljevski, [ ... ], Paul B. Keiser

Statistical analysis of co-occurrence patterns in microbial presence-absence datasets

Kumar P. Mainali, Sharon Bewick, [ ... ], William F. Fagan

Denitrification potential of the eastern oyster microbiome using a 16S rRNA gene based metabolic inference approach

Ann Arfken, Bongkeun Song, Jeff S. Bowman, Michael Piehler

Long-term taxonomic and functional divergence from donor bacterial strains following fecal microbiota transplantation in immunocompromised patients

Eli L. Moss, Shannon B. Falconer, [ ... ], Ami S. Bhatt

Evaluation of metagenetic community analysis of planktonic copepods using Illumina MiSeq: Comparisons with morphological classification and metagenetic analysis using Roche 454

Junya Hirai, Satoshi Nagai, Kiyotaka Hidaka

Taxon abundance, diversity, co-occurrence and network analysis of the ruminal microbiota in response to dietary changes in dairy cows

Ilma Tapio, Daniel Fischer, [ ... ], Johanna Vilkki

Variation between the oral and faecal microbiota in a free-living passerine bird, the great tit (Parus major)

Lucie Kropáčková, Hana Pechmanová, [ ... ], Jakub Kreisinger

Impact of maintenance immunosuppressive therapy on the fecal microbiome of renal transplant recipients: Comparison between an everolimus- and a standard tacrolimus-based regimen

Gianluigi Zaza, Alessandra Dalla Gassa, [ ... ], Antonio Lupo

The functional microbiome of arthropods

Mauro Degli Esposti, Esperanza Martinez Romero

MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads

Thomas Nordahl Petersen, Oksana Lukjancenko, [ ... ], Thomas Sicheritz-Pontén

Patterns of variation in diversity of the Mississippi river microbiome over 1,300 kilometers

Jason T. Payne, Justin J. Millar, Colin R. Jackson, Clifford A. Ochs

Dysbiosis and compositional alterations with aging in the gut microbiota of patients with heart failure

Takehiro Kamo, Hiroshi Akazawa, [ ... ], Issei Komuro

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