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Microbial taxonomy

A snapshot of gut microbiota of an adult urban population from Western region of India

Disha Tandon, Mohammed Monzoorul Haque, Saravanan R., Shafiq Shaikh, Sriram P., Ashok Kumar Dubey, Sharmila S. Mande

published 06 Apr 2018

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Comparison of gizzard and intestinal microbiota of wild neotropical birds

M. Alexandra García-Amado, Hakdong Shin, Virginia Sanz, Miguel Lentino, L. Margarita Martínez, Monica Contreras, Fabian Michelangeli, María Gloria Domínguez-Bello

published 26 Mar 2018

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Variability in metagenomic samples from the Puget Sound: Relationship to temporal and anthropogenic impacts

James C. Wallace, Jessica E. Youngblood, Jesse A. Port, Alison C. Cullen, Marissa N. Smith, Tomomi Workman, Elaine M. Faustman

published 13 Feb 2018

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The analysis of the oral DNA virome reveals which viruses are widespread and rare among healthy young adults in Valencia (Spain)

Vicente Pérez-Brocal, Andrés Moya

published 08 Feb 2018

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Effects of an EPSPS-transgenic soybean line ZUTS31 on root-associated bacterial communities during field growth

Gui-Hua Lu, Cheng-Yi Tang, Xiao-Mei Hua, Jing Cheng, Gu-Hao Wang, Yin-Ling Zhu, Li-Ya Zhang, Hui-Xia Shou, Jin-Liang Qi, Yong-Hua Yang

published 06 Feb 2018

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Taxonomically-linked growth phenotypes during arsenic stress among arsenic resistant bacteria isolated from soils overlying the Centralia coal seam fire

Taylor K. Dunivin, Justine Miller, Ashley Shade

published 25 Jan 2018

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Extension of the viral ecology in humans using viral profile hidden Markov models

Zurab Bzhalava, Emilie Hultin, Joakim Dillner

published 19 Jan 2018

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Culture-independent analysis of liver abscess using nanopore sequencing

Liang Gong, Yao-Ting Huang, Chee-Hong Wong, Wen-Cheng Chao, Zong-Yen Wu, Chia-Lin Wei, Po-Yu Liu

published 09 Jan 2018

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Zika virus infection modulates the bacterial diversity associated with Aedes aegypti as revealed by metagenomic analysis

Luis E. M. Villegas, Thais B. Campolina, Nilton R. Barnabe, Alessandra S. Orfano, Barbara A. Chaves, Douglas E. Norris, Paulo F. P. Pimenta, Nagila F. C Secundino

published 02 Jan 2018

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A confidence interval analysis of sampling effort, sequencing depth, and taxonomic resolution of fungal community ecology in the era of high-throughput sequencing

Ryoko Oono

published 18 Dec 2017

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Composition and variation of respiratory microbiota in healthy military personnel

Jun Hang, Nela Zavaljevski, Yu Yang, Valmik Desai, Richard C. Ruck, Louis R. Macareo, Richard G. Jarman, Jaques Reifman, Robert A. Kuschner, Paul B. Keiser

published 07 Dec 2017

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Statistical analysis of co-occurrence patterns in microbial presence-absence datasets

Kumar P. Mainali, Sharon Bewick, Peter Thielen, Thomas Mehoke, Florian P. Breitwieser, Shishir Paudel, Arjun Adhikari, Joshua Wolfe, Eric V. Slud, David Karig, William F. Fagan

published 16 Nov 2017

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Denitrification potential of the eastern oyster microbiome using a 16S rRNA gene based metabolic inference approach

Ann Arfken, Bongkeun Song, Jeff S. Bowman, Michael Piehler

published 21 Sep 2017

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