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Microbial mutation

Genomic GC content drifts downward in most bacterial genomes

Bert Ely

published 26 May 2021

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Evaluation of HA-D222G/N polymorphism using targeted NGS analysis in A(H1N1)pdm09 influenza virus in Russia in 2018–2019

Alexey V. Danilenko, Natalia P. Kolosova, Alexander N. Shvalov, Tatyana N. Ilyicheva, Svetlana V. Svyatchenko, Alexander G. Durymanov, Julia A. Bulanovich, Natalia I. Goncharova, Ivan M. Susloparov, Vasiliy Y. Marchenko, Tatyana V. Tregubchak, Elena V. Gavrilova, Rinat A. Maksyutov, Alexander B. Ryzhikov

published 29 Apr 2021

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Risk of rapid evolutionary escape from biomedical interventions targeting SARS-CoV-2 spike protein

Debra Van Egeren, Alexander Novokhodko, Madison Stoddard, Uyen Tran, Bruce Zetter, Michael Rogers, Bradley L. Pentelute, Jonathan M. Carlson, Mark Hixon, Diane Joseph-McCarthy, Arijit Chakravarty

published 28 Apr 2021

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Genomic variation and epidemiology of SARS-CoV-2 importation and early circulation in Israel

Neta S. Zuckerman, Efrat Bucris, Yaron Drori, Oran Erster, Danit Sofer, Rakefet Pando, Ella Mendelson, Orna Mor, Michal Mandelboim

published 26 Mar 2021

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Genomic characterization and evolution of SARS-CoV-2 of a Canadian population

Manna Zhang, Lin Li, Ma Luo, Binhua Liang

published 04 Mar 2021

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Generalized linear models provide a measure of virulence for specific mutations in SARS-CoV-2 strains

Anastasis Oulas, Maria Zanti, Marios Tomazou, Margarita Zachariou, George Minadakis, Marilena M. Bourdakou, Pavlos Pavlidis, George M. Spyrou

published 26 Jan 2021

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In silico comparative genomics of SARS-CoV-2 to determine the source and diversity of the pathogen in Bangladesh

Tushar Ahmed Shishir, Iftekhar Bin Naser, Shah M. Faruque

published 20 Jan 2021

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CD8 T cell epitope generation toward the continually mutating SARS-CoV-2 spike protein in genetically diverse human population: Implications for disease control and prevention

Elisa Guo, Hailong Guo

published 10 Dec 2020

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Mutational networks of escape from transmitted HIV-1 infection

Elma H. Akand, Stephen J. Maher, John M. Murray

published 07 Dec 2020

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SARS-CoV-2 transmission routes from genetic data: A Danish case study

Andreas Bluhm, Matthias Christandl, Fulvio Gesmundo, Frederik Ravn Klausen, Laura Mančinska, Vincent Steffan, Daniel Stilck França, Albert H. Werner

published 29 Oct 2020

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Modeling latent infection transmissions through biosocial stochastic dynamics

Bosiljka Tadić, Roderick Melnik

published 23 Oct 2020

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Time-lapse sentinel surveillance of SARS-CoV-2 spread in India

Mukesh Thakur, Abhishek Singh, Bheem Dutt Joshi, Avijit Ghosh, Sujeet Kumar Singh, Neha Singh, Lalit Kumar Sharma, Kailash Chandra

published 22 Oct 2020

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Similarity between mutation spectra in hypermutated genomes of rubella virus and in SARS-CoV-2 genomes accumulated during the COVID-19 pandemic

Leszek J. Klimczak, Thomas A. Randall, Natalie Saini, Jian-Liang Li, Dmitry A. Gordenin

published 02 Oct 2020

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