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Microbial mutation

Wider Access to Genotypic Space Facilitates Loss of Cooperation in a Bacterial Mutator

Freya Harrison, Angus Buckling

published 25 Feb 2011

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Influenza A Virus Hemagglutinin Antibody Escape Promotes Neuraminidase Antigenic Variation and Drug Resistance

Scott E. Hensley, Suman R. Das, James S. Gibbs, Adam L. Bailey, Loren M. Schmidt, Jack R. Bennink, Jonathan W. Yewdell

published 22 Feb 2011

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The Role of Recombination for the Coevolutionary Dynamics of HIV and the Immune Response

Rafal Mostowy, Roger D. Kouyos, David Fouchet, Sebastian Bonhoeffer

published 18 Feb 2011

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Constrained Pattern of Viral Evolution in Acute and Early HCV Infection Limits Viral Plasticity

Katja Pfafferott, Silvana Gaudieri, Axel Ulsenheimer, Ian James, Malte Heeg, David Nolan, Mina John, Andri Rauch, Simon Mallal, Andrew Lucas, Paul Klenerman, Helmut M. Diepolder, Michaela Lucas

published 08 Feb 2011

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Differences in Reversion of Resistance Mutations to Wild-Type under Structured Treatment Interruption and Related Increase in Replication Capacity

Agnes C. Paquet, John Baxter, Jodi Weidler, Yolanda Lie, Jody Lawrence, Rose Kim, Michael Bates, Eoin Coakley, Colombe Chappey

published 31 Jan 2011

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Dynamics of Viral Evolution and CTL Responses in HIV-1 Infection

Yi Liu, John P. McNevin, Sarah Holte, M. Juliana McElrath, James I. Mullins

published 20 Jan 2011

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Mutation of HIV-1 Genomes in a Clinical Population Treated with the Mutagenic Nucleoside KP1461

James I. Mullins, Laura Heath, James P. Hughes, Jessica Kicha, Sheila Styrchak, Kim G. Wong, Ushnal Rao, Alexis Hansen, Kevin S. Harris, Jean-Pierre Laurent, Deyu Li, Jeffrey H. Simpson, John M. Essigmann, Lawrence A. Loeb, Jeffrey Parkins

published 14 Jan 2011

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Nationwide Molecular Surveillance of Pandemic H1N1 Influenza A Virus Genomes: Canada, 2009

Morag Graham, Binhua Liang, Gary Van Domselaar, Nathalie Bastien, Carole Beaudoin, Shaun Tyler, Brynn Kaplen, Erika Landry, the National Influenza A/H1N1pdm Genomics Study Team (NIGST) , Yan Li

published 07 Jan 2011

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Detection of Resistance Mutations to Antivirals Oseltamivir and Zanamivir in Avian Influenza A Viruses Isolated from Wild Birds

Goran Orozovic, Kanita Orozovic, Johan Lennerstrand, Björn Olsen

published 06 Jan 2011

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Proteochemometric Modeling of the Susceptibility of Mutated Variants of the HIV-1 Virus to Reverse Transcriptase Inhibitors

Muhammad Junaid, Maris Lapins, Martin Eklund, Ola Spjuth, Jarl E. S. Wikberg

published 15 Dec 2010

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Amino-Acid Co-Variation in HIV-1 Gag Subtype C: HLA-Mediated Selection Pressure and Compensatory Dynamics

Morgane Rolland, Jonathan M. Carlson, Siriphan Manocheewa, J. Victor Swain, Erinn Lanxon-Cookson, Wenjie Deng, Christine M. Rousseau, Dana N. Raugi, Gerald H. Learn, Brandon S. Maust, Hoosen Coovadia, Thumbi Ndung'u, Philip J. R. Goulder, Bruce D. Walker, Christian Brander, David E. Heckerman, James I. Mullins

published 01 Sep 2010

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Transmission of Single HIV-1 Genomes and Dynamics of Early Immune Escape Revealed by Ultra-Deep Sequencing

Will Fischer, Vitaly V. Ganusov, Elena E. Giorgi, Peter T. Hraber, Brandon F. Keele, Thomas Leitner, Cliff S. Han, Cheryl D. Gleasner, Lance Green, Chien-Chi Lo, Ambarish Nag, Timothy C. Wallstrom, Shuyi Wang, Andrew J. McMichael, Barton F. Haynes, Beatrice H. Hahn, Alan S. Perelson, Persephone Borrow, George M. Shaw, Tanmoy Bhattacharya, Bette T. Korber

published 20 Aug 2010

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Dynamics of HIV-1 Quasispecies during Antiviral Treatment Dissected Using Ultra-Deep Pyrosequencing

Charlotte Hedskog, Mattias Mild, Johanna Jernberg, Ellen Sherwood, Göran Bratt, Thomas Leitner, Joakim Lundeberg, Björn Andersson, Jan Albert

published 07 Jul 2010

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