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Microbial genetics

Food safety and biological control; genomic insights and antimicrobial potential of Bacillus velezensis FB2 against agricultural fungal pathogens

Masooma Hammad, Hazrat Ali, Noor Hassan, Abdul Tawab, Mahwish Salman, Iqra Jawad, Anne de Jong, Claudia Munoz Moreno, Oscar P. Kuipers, Yusra Feroz, Muhammad Hamid Rashid

published 14 Nov 2023

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Comparative genome analysis of colistin-resistant Escherichia coli harboring mcr isolated from rural community residents in Ecuador and Vietnam

Hoa Thi Thanh Hoang, Mayumi Yamamoto, Manuel Calvopina, Carlos Bastidas-Caldes, Diep Thi Khong, Thang Nam Nguyen, Ryuji Kawahara, Takahiro Yamaguchi, Yoshimasa Yamamoto

published 02 Nov 2023

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Characterization of 3D organotypic epithelial tissues reveals tonsil-specific differences in tonic interferon signaling

Robert Jackson, Esha V. Rajadhyaksha, Reid S. Loeffler, Caitlyn E. Flores, Koenraad Van Doorslaer

published 04 Oct 2023

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Fast genome-based delimitation of Enterobacterales species

Julie E. Hernández-Salmerón, Tanya Irani, Gabriel Moreno-Hagelsieb

published 14 Sep 2023

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Complete genome assembly of Hawai’i environmental nontuberculous mycobacteria reveals unexpected co-isolation with methylobacteria

Jo Hendrix, L. Elaine Epperson, Eric I. Tong, Yvonne L. Chan, Nabeeh A. Hasan, Stephanie N. Dawrs, Grant J. Norton, Ravleen Virdi, James L. Crooks, Edward D. Chan, Jennifer R. Honda, Michael Strong

published 13 Sep 2023

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Comparative genomics of the proteostasis network in extreme acidophiles

Katherin Izquierdo-Fiallo, Claudia Muñoz-Villagrán, Omar Orellana, Rachid Sjoberg, Gloria Levicán

published 08 Sep 2023

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Genomic characterization of a novel, widely distributed Mycoplasma species “Candidatus Mycoplasma mahonii” associated with the brittlestar Gorgonocephalus chilensis

Oluchi Aroh, Mark R. Liles, Kenneth M. Halanych

published 24 Aug 2023

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Persistent Salmonella enterica serovar Typhi sub-populations within host interrogated by whole genome sequencing and metagenomics

Eby M. Sim, Qinning Wang, Peter Howard, Rady Kim, Ling Lim, Kirsty Hope, Vitali Sintchenko

published 23 Aug 2023

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MT-MAG: Accurate and interpretable machine learning for complete or partial taxonomic assignments of metagenome-assembled genomes

Wanxin Li, Lila Kari, Yaoliang Yu, Laura A. Hug

published 18 Aug 2023

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Genomic characterization of Campylobacter isolates in Huzhou, China

Xiaofang Wu, Lei Ji, Yuehua Shen, Liping Chen, Deshun Xu, Fenfen Dong

published 17 Aug 2023

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Evaluation of an inducible knockout system in insect cells based on co-infection and CRISPR/Cas9

Christina Sophie Hausjell, Miriam Klausberger, Wolfgang Ernst, Reingard Grabherr

published 27 Jul 2023

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The selection and validation of reference genes for quantitative real-time PCR studies in near-isogenic susceptible and resistant tomato lines, infected with the geminivirus tomato curly stunt virus

Mamokete Bokhale, Imanu Mwaba, Farhahna Allie

published 27 Jul 2023

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Description and genome-wide analysis of Profundicola chukchiensis gen. nov., sp. nov., marine bacteria isolated from bottom sediments of the Chukchi Sea

Lyudmila Romanenko, Nadezhda Otstavnykh, Valeriya Kurilenko, Peter Velansky, Viacheslav Eremeev, Valery Mikhailov, Marina P. Isaeva

published 26 Jul 2023

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