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Microbial genetics

The Conserved nhaAR Operon Is Drastically Divergent between B2 and Non-B2 Escherichia coli and Is Involved in Extra-Intestinal Virulence

Mathilde Lescat, Florence Reibel, Coralie Pintard, Sara Dion, Jérémy Glodt, Cecile Gateau, Adrien Launay, Alice Ledda, Stephane Cruvellier, Jérôme Tourret, Olivier Tenaillon

published 30 Sep 2014

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Genome Features of the Endophytic Actinobacterium Micromonospora lupini Strain Lupac 08: On the Process of Adaptation to an Endophytic Life Style?

Martha E. Trujillo, Rodrigo Bacigalupe, Petar Pujic, Yasuhiro Igarashi, Patricia Benito, Raúl Riesco, Claudine Médigue, Philippe Normand

published 30 Sep 2014

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Defining Differential Genetic Signatures in CXCR4- and the CCR5-Utilizing HIV-1 Co-Linear Sequences

Benjamas Aiamkitsumrit, Will Dampier, Julio Martin-Garcia, Michael R. Nonnemacher, Vanessa Pirrone, Tatyana Ivanova, Wen Zhong, Evelyn Kilareski, Hazeez Aldigun, Brian Frantz, Matthew Rimbey, Adam Wojno, Shendra Passic, Jean W. Williams, Sonia Shah, Brandon Blakey, Nirzari Parikh, Jeffrey M. Jacobson, Brian Moldover, Brian Wigdahl

published 29 Sep 2014

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Analysis of the Relationship between Genomic GC Content and Patterns of Base Usage, Codon Usage and Amino Acid Usage in Prokaryotes: Similar GC Content Adopts Similar Compositional Frequencies Regardless of the Phylogenetic Lineages

Hui-Qi Zhou, Lu-Wen Ning, Hui-Xiong Zhang, Feng-Biao Guo

published 25 Sep 2014

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Benchmarking Undedicated Cloud Computing Providers for Analysis of Genomic Datasets

Seyhan Yazar, George E. C. Gooden, David A. Mackey, Alex W. Hewitt

published 23 Sep 2014

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Age and Microenvironment Outweigh Genetic Influence on the Zucker Rat Microbiome

Hannah Lees, Jonathan Swann, Simon M. Poucher, Jeremy K. Nicholson, Elaine Holmes, Ian D. Wilson, Julian R. Marchesi

published 18 Sep 2014

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Altered Expression of Immune-Related Genes in Children with Down Syndrome

Bruna Lancia Zampieri, Joice Matos Biselli-Périco, Jorge Estefano Santana de Souza, Matheus Carvalho Bürger, Wilson Araújo Silva Júnior, Eny Maria Goloni-Bertollo, Érika Cristina Pavarino

published 15 Sep 2014

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Genome Information of Methylobacterium oryzae, a Plant-Probiotic Methylotroph in the Phyllosphere

Min-Jung Kwak, Haeyoung Jeong, Munusamy Madhaiyan, Yi Lee, Tong-Min Sa, Tae Kwang Oh, Jihyun F. Kim

published 11 Sep 2014

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Asthma Is Associated with Multiple Alterations in Anti-Viral Innate Signalling Pathways

Antonia L. Pritchard, Olivia J. White, Julie G. Burel, Melanie L. Carroll, Simon Phipps, John W. Upham

published 09 Sep 2014

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GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers

Sebastian Jünemann, Karola Prior, Andreas Albersmeier, Stefan Albaum, Jörn Kalinowski, Alexander Goesmann, Jens Stoye, Dag Harmsen

published 08 Sep 2014

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De Novo Assembly and Characterization of the Fruit Transcriptome of Chinese Jujube (Ziziphus jujuba Mill.) Using 454 Pyrosequencing and the Development of Novel Tri-Nucleotide SSR Markers

Yingyue Li, Chaoqun Xu, Xinggu Lin, Binbin Cui, Rongling Wu, Xiaoming Pang

published 03 Sep 2014

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Characterization and Plasmid Elimination of NDM-1-Producing Acinetobacter calcoaceticus from China

Yang Sun, Qi Liu, Shuo Chen, Yang Song, Jun Liu, Xuejun Guo, Lingwei Zhu, Xue Ji, Lizhi Xu, Wei Zhou, Jun Qian, Shuzhang Feng

published 02 Sep 2014

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Inducible Resistance to Maize Streak Virus

Dionne N. Shepherd, Benjamin Dugdale, Darren P. Martin, Arvind Varsani, Francisco M. Lakay, Marion E. Bezuidenhout, Adérito L. Monjane, Jennifer A. Thomson, James Dale, Edward P. Rybicki

published 28 Aug 2014

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