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Microbial genetics

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

Bruce J. Walker, Thomas Abeel, [ ... ], Ashlee M. Earl

Variable Episomal Silencing of a Recombinant Herpesvirus Renders Its Encoded GFP an Unreliable Marker of Infection in Primary Cells

Thomas J. Ellison, Dean H. Kedes

Comparative Genomic Analysis Shows That Avian Pathogenic Escherichia coli Isolate IMT5155 (O2:K1:H5; ST Complex 95, ST140) Shares Close Relationship with ST95 APEC O1:K1 and Human ExPEC O18:K1 Strains

Xiangkai Zhu Ge, Jingwei Jiang, [ ... ], Hongjie Fan

Inflammation-Induced Reactivation of the Ranavirus Frog Virus 3 in Asymptomatic Xenopus laevis

Jacques Robert, Leon Grayfer, [ ... ], Francisco De Jesús Andino

Toxin-Antitoxin Systems in the Mobile Genome of Acidithiobacillus ferrooxidans

Paula Bustamante, Mario Tello, Omar Orellana

Characterization of the YdeO Regulon in Escherichia coli

Yuki Yamanaka, Taku Oshima, Akira Ishihama, Kaneyoshi Yamamoto

Toll-Like Receptor Responses to Peste des petits ruminants Virus in Goats and Water Buffalo

Sakthivel Dhanasekaran, Moanaro Biswas, [ ... ], Elankumaran Subbiah

A Phylogeny-Based Benchmarking Test for Orthology Inference Reveals the Limitations of Function-Based Validation

Kalliopi Trachana, Kristoffer Forslund, [ ... ], Peer Bork

MetaGeniE: Characterizing Human Clinical Samples Using Deep Metagenomic Sequencing

Arun Rawat, David M. Engelthaler, [ ... ], Jeffrey T. Foster

Comparative Genomics to Delineate Pathogenic Potential in Non-O157 Shiga Toxin-Producing Escherichia coli (STEC) from Patients with and without Haemolytic Uremic Syndrome (HUS) in Norway

Kjersti Haugum, Jostein Johansen, [ ... ], Jan Egil Afset

The Predatory Bacterium Bdellovibrio bacteriovorus Aspartyl-tRNA Synthetase Recognizes tRNA^Asn as a Substrate

Ariel Alperstein, Brittany Ulrich, [ ... ], Kelly Sheppard

The Functional Potential of Microbial Communities in Hydraulic Fracturing Source Water and Produced Water from Natural Gas Extraction Characterized by Metagenomic Sequencing

Arvind Murali Mohan, Kyle J. Bibby, [ ... ], Kelvin B. Gregory

MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems

Sophie S. Abby, Bertrand Néron, [ ... ], Eduardo P. C. Rocha

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