Microbial genetics

Exploring the molecular and biological mechanisms of host response in chickens infected with highly pathogenic avian influenza virus (H5N1): An integrative transcriptomic analysis

Sare Golpasand, Shahrokh Ghovvati, Zahra Pezeshkian

published 03 Oct 2025

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Comparison of cellular responses of cultured fibroblasts from Iriomote wild cats and domestic cats exposure to polyinosinic:polycytidylic acid

Masafumi Katayama, Ayusa Kataoka, Tomokazu Fukuda, Manabu Onuma

published 25 Sep 2025

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Unraveling the genomic complexity of secretion systems in the most virulent Xanthomonas arboricola pathovars

Sara Cuesta-Morrondo, Jerson Garita-Cambronero, Jaime Cubero

published 19 Sep 2025

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Comprehensive genomic analysis of Xenorhabdus bovienii strain MEL2.2

Wipanee Meesil, Liam K. R. Sharkey, Sacha J. Pidot, Aunchalee Thanwisai

published 25 Aug 2025

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Vitamin D enhances antiviral responses in dengue virus-infected macrophages by modulating early-response gene expression

Yordi Sebastián Tamayo-Molina, Juan Felipe Valdés-López, Geysson J. Fernandez, Silvio Urcuqui-Inchima

published 21 Aug 2025

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Investigation of mobile genetic elements and their association with antibiotic resistance genes in clinical pathogens worldwide

Markus H. K. Johansson, Thomas N. Petersen, Sidsel Nag, Timmie M. R. Lagermann, Laura E.K. Birkedahl, Silva Tafaj, Susan Bradbury, Peter Collignon, Denise Daley, Victorien Dougnon, Kafayath Fabiyi, Boubacar Coulibaly, Réné Dembélé, Natama Magloire, Isidore J. Ouindgueta, Zenat Z. Hossain, Anowara Begoum, Deyan Donchev, Mathew Diggle, LeeAnn Turnbull, Simon Lévesque, Livia Berlinger, Kirstine K. Søgaard, Paula D. Guevara, Carolina Duarte, Panagiota Maikanti, Jana Amlerova, Pavel Drevinek, Jan Tkadlec, Milica Dilas, Achim Kaasch, Henrik T. Westh, Mohamed A. Bachtarzi, Wahiba Amhis, Carolina E.S. Salazar, José E. Villacis, Mária A. D. Lúzon, Dàmaris B. Palau, Claire Duployez, Maxime Paluche, Solomon Asante-Sefa, Mie Møller, Margaret Ip, Ivana Mareković, Agnes Pál-Sonnevend, Clementiza E. Cocuzza, Asta Dambrauskiene, Alexandre Macanze, Anelsio Cossa, Inácio Mandomando, Philip Nwajiobi-Princewill, Iruka N. Okeke, Aderemi O. Kehinde, Ini Adebiyi, Ifeoluwa Akintayo, Oluwafemi Popoola, Anthony Onipede, Anita Blomfeldt, Nora E. Nyquist, Kiri Bocker, James Ussher, Amjad Ali, Nimat Ullah, Habibullah Khan, Natalie W. Gustafson, Ikhlas Jarrar, Arif Al-Hamad, Viravarn Luvira, Wantana Paveenkittiporn, Irmak Baran, James C. L. Mwansa, Linda Sikakwa, Kaunda Yamba, Frank M. Aarestrup

published 18 Aug 2025

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Genome-driven insights into Bacillus safensis strain B7 as a seed coating agent for plant growth promotion and alleviation of biotic and abiotic stresses

Maissa Ben-Jabeur, Zayneb Kthiri, Salma Jallouli, Kalthoum Harbaoui, Zoubeir Chamekh, Sawsen Ayadi, Youssef Trifa, Walid Hamada

published 18 Aug 2025

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The porphyran degradation system is complete, phylogenetically and geographically diverse across the gut microbiota of East Asian populations

Laure Ségurel, Thirumalai Selvi Ulaganathan, Sophie Mathieu, Mélanie Loiodice, Laurent Poulet, Sophie Drouillard, Miroslaw Cygler, William Helbert

published 01 Aug 2025

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OpDetect: A convolutional and recurrent neural network classifier for precise and sensitive operon detection from RNA-seq data

Rezvan Karaji, Lourdes Peña-Castillo

published 01 Aug 2025

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Genetic clustering within massive Porites species complex is the primary driver of holobiont assembly

Carly B. Scott, Raegen Schott, Mikhail V. Matz

published 17 Jul 2025

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Whole genome-based reclassification of several species of the genus Nonomuraea

Noureddine Bouras, Imen Nouioui, Guendouz Dif, Fawzia Chaabane Chaouch, Sherif S. Ebada

published 01 Jul 2025

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Comparative genomics of Lentilactobacillus buchneri reveals strain-level hyperdiversity and broad-spectrum CRISPR immunity against human and livestock gut phages

Ismail Gumustop, Ibrahim Genel, Ibrahim Cagri Kurt, Fatih Ortakci

published 10 Jun 2025

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A new nodule-associated bacterium, Cupriavidus consociatus sp. nov. Isolated from the root nodules of Leucaena sp. and Arachis sp. growing in a cacao field in Chiapas, Mexico

Erika-Yanet Tapia-García, Belén Chávez-Ramírez, Violeta Larios-Serrato, Ivan Arroyo-Herrera, J. Antonio Ibarra, Paulina Estrada-de los Santos

published 27 May 2025

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Microbial genetics

Exploring the molecular and biological mechanisms of host response in chickens infected with highly pathogenic avian influenza virus (H5N1): An integrative transcriptomic analysis

Comparison of cellular responses of cultured fibroblasts from Iriomote wild cats and domestic cats exposure to polyinosinic:polycytidylic acid

Unraveling the genomic complexity of secretion systems in the most virulent Xanthomonas arboricola pathovars

Comprehensive genomic analysis of Xenorhabdus bovienii strain MEL2.2

Vitamin D enhances antiviral responses in dengue virus-infected macrophages by modulating early-response gene expression

Investigation of mobile genetic elements and their association with antibiotic resistance genes in clinical pathogens worldwide

Genome-driven insights into Bacillus safensis strain B7 as a seed coating agent for plant growth promotion and alleviation of biotic and abiotic stresses

The porphyran degradation system is complete, phylogenetically and geographically diverse across the gut microbiota of East Asian populations

OpDetect: A convolutional and recurrent neural network classifier for precise and sensitive operon detection from RNA-seq data

Genetic clustering within massive Porites species complex is the primary driver of holobiont assembly

Whole genome-based reclassification of several species of the genus Nonomuraea

Comparative genomics of Lentilactobacillus buchneri reveals strain-level hyperdiversity and broad-spectrum CRISPR immunity against human and livestock gut phages

A new nodule-associated bacterium, Cupriavidus consociatus sp. nov. Isolated from the root nodules of Leucaena sp. and Arachis sp. growing in a cacao field in Chiapas, Mexico

Microbial genetics

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