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Microbial genetics

De novo genome assembly of Bacillus altitudinis 19RS3 and Bacillus altitudinis T5S-T4, two plant growth-promoting bacteria isolated from Ilex paraguariensis St. Hil. (yerba mate)

Iliana Julieta Cortese, María Lorena Castrillo, [ ... ], Margarita Ester Laczeski

Distribution and preservation of the components of the engulfment. What is beyond representative genomes?

Lizeth Soto-Avila, Ricardo Ciria Merce, [ ... ], Rosa-María Gutierrez-Ríos

Extraction-free protocol combining proteinase K and heat inactivation for detection of SARS-CoV-2 by RT-qPCR

Valeria Genoud, Martin Stortz, [ ... ], Valeria Levi

Transcriptomic profiling and genomic mutational analysis of Human coronavirus (HCoV)-229E -infected human cells

Nehemya Friedman, Jasmine Jacob-Hirsch, [ ... ], Michal Mandelboim

Whole genome genetic variation and linkage disequilibrium in a diverse collection of Listeria monocytogenes isolates

Swarnali Louha, Richard J. Meinersmann, Travis C. Glenn

Analysis of lung transcriptome in calves infected with Bovine Respiratory Syncytial Virus and treated with antiviral and/or cyclooxygenase inhibitor

Maxim Lebedev, Heather A. McEligot, [ ... ], Laurel J. Gershwin

Genomic diversity and organization of complex polysaccharide biosynthesis clusters in the genus Dickeya

Manish Ranjan, Devanshi Khokhani, [ ... ], Ashish Ranjan

Recombinase polymerase amplification assay combined with a dipstick-readout for rapid detection of Mycoplasma ovipneumoniae infections

Sandeep K. Gupta, Qing Deng, [ ... ], D. Neil Wedlock

HDG-select: A novel GUI based application for gene selection and classification in high dimensional datasets

Shilan S. Hameed, Rohayanti Hassan, [ ... ], Liza Abdul Latiff

Precision long-read metagenomics sequencing for food safety by detection and assembly of Shiga toxin-producing Escherichia coli in irrigation water

Meghan Maguire, Julie A. Kase, [ ... ], Narjol González-Escalona

Efficient association mapping from k-mers—An application in finding sex-specific sequences

Zakaria Mehrab, Jaiaid Mobin, Ibrahim Asadullah Tahmid, Atif Rahman

metaVaR: Introducing metavariant species models for reference-free metagenomic-based population genomics

Romuald Laso-Jadart, Christophe Ambroise, Pierre Peterlongo, Mohammed-Amin Madoui

Tracing the active genetic diversity of Microcystis and Microcystis phage through a temporal survey of Taihu

Helena L. Pound, Steven W. Wilhelm

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