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Microbial genetics

Inconsistent PCR detection of Shiga toxin-producing Escherichia coli: Insights from whole genome sequence analyses

Vinicius Silva Castro, Rodrigo Ortega Polo, [ ... ], Kim Stanford

Prognosis of recurrent bacterial vaginosis based on longitudinal changes in abundance of Lactobacillus and specific species of Gardnerella

Essence Turner, Jack D. Sobel, Robert A. Akins

Distributed hybrid-indexing of compressed pan-genomes for scalable and fast sequence alignment

Altti Ilari Maarala, Ossi Arasalo, [ ... ], Keijo Heljanko

Modeling neutral viral mutations in the spread of SARS-CoV-2 epidemics

Vitor M. Marquioni, Marcus A. M. de Aguiar

Return of individual research results: What do participants prefer and expect?

Sabina Sayeed, Robert Califf, [ ... ], on behalf of the Project Baseline Health Study Research Group

RNA polymerases in strict endosymbiont bacteria with extreme genome reduction show distinct erosions that might result in limited and differential promoter recognition

Cynthia Paola Rangel-Chávez, Edgardo Galán-Vásquez, [ ... ], Agustino Martínez-Antonio

Plasmid analysis of NDM metallo-β-lactamase-producing Enterobacterales isolated in Vietnam

Aki Hirabayashi, Koji Yahara, [ ... ], Masato Suzuki

Compositional analysis of ruminal bacteria from ewes selected for somatic cell score and milk persistency

Guillermo Martinez Boggio, Annabelle Meynadier, Pepus Daunis-i-Estadella, Christel Marie-Etancelin

Genomic insights into methicillin-resistant Staphylococcus pseudintermedius isolates from dogs and humans of the same sequence types reveals diversity in prophages and pathogenicity islands

Nathita Phumthanakorn, Sybille Schwendener, [ ... ], Nuvee Prapasarakul

Comparative genomics of DNA-binding transcription factors in archaeal and bacterial organisms

Luis Martinez-Liu, Rafael Hernandez-Guerrero, [ ... ], Ernesto Perez-Rueda

HIV-1 Gag gene mutations, treatment response and drug resistance to protease inhibitors: A systematic review and meta-analysis protocol

Alex Durand Nka, Georges Teto, [ ... ], Joseph Fokam

High-throughput sequencing reveals genetic determinants associated with antibiotic resistance in Campylobacter spp. from farm-to-fork

Shaimaa F. Mouftah, José F. Cobo-Díaz, [ ... ], Mohamed Elhadidy

Evaluating coverage bias in next-generation sequencing of Escherichia coli

Samantha Gunasekera, Sam Abraham, [ ... ], Mark O’Dea

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