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Microbial genetics

Virulome and genome analyses identify associations between antimicrobial resistance genes and virulence factors in highly drug-resistant Escherichia coli isolated from veal calves

Bradd J. Haley, Seon Woo Kim, Serajus Salaheen, Ernest Hovingh, Jo Ann S. Van Kessel

published 17 Mar 2022

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dbGSRV: A manually curated database of genetic susceptibility to respiratory virus

Ping Li, Yan Zhang, Wenlong Shen, Shu Shi, Zhihu Zhao

published 17 Mar 2022

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Distinction of Paramecium strains by a combination method of RAPD analysis and multiplex PCR

Sonoko Matsumoto, Kenta Watanabe, Hiroko Kiyota, Masato Tachibana, Takashi Shimizu, Masahisa Watarai

published 11 Mar 2022

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Whole genome sequence of pan drug-resistant clinical isolate of Acinetobacter baumannii ST1890

Thanwa Wongsuk, Siriphan Boonsilp, Anchalee Homkaew, Konrawee Thananon, Worrapoj Oonanant

published 09 Mar 2022

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Effect of cryopreservation on A172 and U251 glioma cells infected with lentiviral vectors designed for CRISPR/Cas9-mediated aquaporin-8 knock-out

Hao Zhang, Shujuan Zhu, Yu Xing, Qian Liu, Zhen Guo, Ziling Cai, Zihao Shen, Qingqian Xia, Huajun Sheng

published 04 Mar 2022

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Identifying protein function and functional links based on large-scale co-occurrence patterns

Zohar Pasternak, Noam Chapnik, Roy Yosef, Naama M. Kopelman, Edouard Jurkevitch, Elad Segev

published 03 Mar 2022

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Similarities between bacterial GAD and human GAD65: Implications in gut mediated autoimmune type 1 diabetes

Suhana Bedi, Tiffany M. Richardson, Baofeng Jia, Hadeel Saab, Fiona S. L. Brinkman, Monica Westley

published 23 Feb 2022

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In silico, in vitro and in vivo safety evaluation of Limosilactobacillus reuteri strains ATCC PTA-126787 & ATCC PTA-126788 for potential probiotic applications

Dharanesh Gangaiah, Shrinivasrao P. Mane, Nilesh R. Tawari, Nallakannu Lakshmanan, Valerie Ryan, Alyssa Volland, Dwi Susanti, Milind Patel, Abraham Abouzeid, Emily B. Helmes, Arvind Kumar

published 26 Jan 2022

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Pooling saliva samples as an excellent option to increase the surveillance for SARS-CoV-2 when re-opening community settings

Joaquín Moreno-Contreras, Marco A. Espinoza, Carlos Sandoval-Jaime, Marco A. Cantú-Cuevas, Daniel A. Madrid-González, Héctor Barón-Olivares, Oscar D. Ortiz-Orozco, Asunción V. Muñoz-Rangel, Cecilia Guzmán-Rodríguez, Manuel Hernández-de la Cruz, César M. Eroza-Osorio, Carlos F. Arias, Susana López

published 25 Jan 2022

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Multilocus sequence based identification and adaptational strategies of Pseudomonas sp. from the supraglacial site of Sikkim Himalaya

Srijana Mukhia, Anil Kumar, Poonam Kumari, Rakshak Kumar, Sanjay Kumar

published 24 Jan 2022

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Machine learning classification of trajectories from molecular dynamics simulations of chromosome segregation

David Geisel, Peter Lenz

published 21 Jan 2022

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DeLUCS: Deep learning for unsupervised clustering of DNA sequences

Pablo Millán Arias, Fatemeh Alipour, Kathleen A. Hill, Lila Kari

published 21 Jan 2022

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Mycobacterial MMAR_2193 catalyzes O-methylation of diverse polyketide cores

Gorkha Raj Giri, Priti Saxena

published 05 Jan 2022

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