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Microbial genetics

Sequencing of the invasive E. coli strain BEN2908 isolated from poultry: A comparative investigation of genomic regions shared with intestinal and extraintestinal model E. coli strains

Tobias Weber Martins, Angélina Trotereau, [ ... ], Catherine Schouler

Centriflaken: An automated data analysis pipeline for assembly and in silico analyses of foodborne pathogens from metagenomic samples

Kranti Konganti, Julie A. Kase, Narjol Gonzalez-Escalona

Candidate orphan genes: Reassessing uniqueness

Sheetalpreet K. Maan, Xuan Y. Butzin, Steven X. Ge, Nicholas C. Butzin

Whole-genome sequencing of Burkholderia glumae strains from Thailand reveals potential horizontal gene transfer with Burkholderia pseudomallei

Sujin Patarapuwadol, Woranich Hintong, [ ... ], Jiraphan Premsuriya

Single-tube two-step RPA-CRISPR/Cas12b platform for detection of Pseudomonas aeruginosa

Haotian Lin, Shichun Wang, [ ... ], Hongxing Zhang

Whole genome sequence of multidrug-resistant Staphylococcus haemolyticus and Enterococcus faecalis isolates from public gymnasium equipment reveals evolving infection potential and resistance

Goutam Banerjee, Pratik Banerjee

Silent spread of mcr-9 in ESBL-producing Enterobacteriaceae clinical isolates, Jimma, Ethiopia

Tsegaye Sewunet, Mohammad Razavi, Chaitanya Tellapragada, Christian G. Giske

Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing

Alexandra Florea, Nick Wade, [ ... ], Tim P. Bean

Systematic analysis of spontaneous tandem genome amplification events in Yersinia pestis

Dmitry N. Konanov, Olga N. Liubimova, [ ... ], Vladimir V. Kutyrev

Genomic and chemical insights into a human lectin-binding extracellular polysaccharides from Parageobacillus toebii strain H-70

Diana Ghevondyan, Armine Margaryan, [ ... ], Hovik Panosyan

DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach

Albertas Dvirnas, Luis Mario Leal-Garza, [ ... ], Tobias Ambjörnsson

Direct LAMP for on-site rapid detection of Vibrio parahaemolyticus in shrimp (Litopenaeus vannamei) aquaculture water

Xiaodan Pu, Feng Lu, [ ... ], Xuzhi Zhang

Identification of an optimal exogenous gene insertion site (P–M) and establishment of a reverse genetics system for aMPV/A

Yu Guo, Ting Xue, [ ... ], Jianhua Wang

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