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Microbial genetics

The First Bite— Profiling the Predatosome in the Bacterial Pathogen Bdellovibrio

Carey Lambert, Chien-Yi Chang, Michael J. Capeness, R. Elizabeth Sockett

Proteomic Detection of Non-Annotated Protein-Coding Genes in Pseudomonas fluorescens Pf0-1

Wook Kim, Mark W. Silby, [ ... ], Stuart B. Levy

High Throughput Sequencing and Proteomics to Identify Immunogenic Proteins of a New Pathogen: The Dirty Genome Approach

Gilbert Greub, Carole Kebbi-Beghdadi, [ ... ], Didier Raoult

Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler

Daniel R. Zerbino, Gayle K. McEwen, Elliott H. Margulies, Ewan Birney

Antigen Diversity in the Parasitic Bacterium Anaplasma phagocytophilum Arises from Selectively-Represented, Spatially Clustered Functional Pseudogenes

Janet E. Foley, Nathan C. Nieto, Anthony Barbet, Patrick Foley

Systems-Level Comparison of Host-Responses Elicited by Avian H5N1 and Seasonal H1N1 Influenza Viruses in Primary Human Macrophages

Suki M. Y. Lee, Jennifer L. Gardy, [ ... ], J. S. Malik Peiris

Examination of Genome Homogeneity in Prokaryotes Using Genomic Signatures

Jon Bohlin, Eystein Skjerve

The Association of Virulence Factors with Genomic Islands

Shannan J. Ho Sui, Amber Fedynak, [ ... ], Fiona S. L. Brinkman

Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System

Konstantinos Mavromatis, Ken Chu, [ ... ], Nikos C. Kyrpides

Gene Expression Profiling during Early Acute Febrile Stage of Dengue Infection Can Predict the Disease Outcome

Eduardo J. M. Nascimento, Ulisses Braga-Neto, [ ... ], Ernesto T. A. Marques Jr

Genotyping of Genetically Monomorphic Bacteria: DNA Sequencing in Mycobacterium tuberculosis Highlights the Limitations of Current Methodologies

Iñaki Comas, Susanne Homolka, Stefan Niemann, Sebastien Gagneux

Genome Sequence of the Versatile Fish Pathogen Edwardsiella tarda Provides Insights into its Adaptation to Broad Host Ranges and Intracellular Niches

Qiyao Wang, Minjun Yang, [ ... ], Yuanxing Zhang

Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli

Alfredo Mendoza-Vargas, Leticia Olvera, [ ... ], Enrique Morett

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