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Microbial genetics

De Novo Assembly of the Complete Genome of an Enhanced Electricity-Producing Variant of Geobacter sulfurreducens Using Only Short Reads

Harish Nagarajan, Jessica E. Butler, Anna Klimes, Yu Qiu, Karsten Zengler, Joy Ward, Nelson D. Young, Barbara A. Methé, Bernhard Ø. Palsson, Derek R. Lovley, Christian L. Barrett

published 08 Jun 2010

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The Waddlia Genome: A Window into Chlamydial Biology

Claire Bertelli, François Collyn, Antony Croxatto, Christian Rückert, Adam Polkinghorne, Carole Kebbi-Beghdadi, Alexander Goesmann, Lloyd Vaughan, Gilbert Greub

published 28 May 2010

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The GimA Locus of Extraintestinal Pathogenic E. coli: Does Reductive Evolution Correlate with Habitat and Pathotype?

Timo Homeier, Torsten Semmler, Lothar H. Wieler, Christa Ewers

published 28 May 2010

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Cartography of Methicillin-Resistant S. aureus Transcripts: Detection, Orientation and Temporal Expression during Growth Phase and Stress Conditions

Marie Beaume, David Hernandez, Laurent Farinelli, Cécile Deluen, Patrick Linder, Christine Gaspin, Pascale Romby, Jacques Schrenzel, Patrice Francois

published 20 May 2010

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The Complete Genome Sequence of Cupriavidus metallidurans Strain CH34, a Master Survivalist in Harsh and Anthropogenic Environments

Paul J. Janssen, Rob Van Houdt, Hugo Moors, Pieter Monsieurs, Nicolas Morin, Arlette Michaux, Mohammed A. Benotmane, Natalie Leys, Tatiana Vallaeys, Alla Lapidus, Sébastien Monchy, Claudine Médigue, Safiyh Taghavi, Sean McCorkle, John Dunn, Daniël van der Lelie, Max Mergeay

published 05 May 2010

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One Bacterial Cell, One Complete Genome

Tanja Woyke, Damon Tighe, Konstantinos Mavromatis, Alicia Clum, Alex Copeland, Wendy Schackwitz, Alla Lapidus, Dongying Wu, John P. McCutcheon, Bradon R. McDonald, Nancy A. Moran, James Bristow, Jan-Fang Cheng

published 23 Apr 2010

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Universal Global Imprints of Genome Growth and Evolution – Equivalent Length and Cumulative Mutation Density

Hong-Da Chen, Wen-Lang Fan, Sing-Guan Kong, Hoong-Chien Lee

published 14 Apr 2010

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A Benchmark of Parametric Methods for Horizontal Transfers Detection

Jennifer Becq, Cécile Churlaud, Patrick Deschavanne

published 01 Apr 2010

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Inference of Functional Relations in Predicted Protein Networks with a Machine Learning Approach

Beatriz García-Jiménez, David Juan, Iakes Ezkurdia, Eduardo Andrés-León, Alfonso Valencia

published 01 Apr 2010

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Comparing Transcription Rate and mRNA Abundance as Parameters for Biochemical Pathway and Network Analysis

Brewster Hayles, Sailu Yellaboina, Degeng Wang

published 26 Mar 2010

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Abundant Oligonucleotides Common to Most Bacteria

Colin F. Davenport, Burkhard Tümmler

published 23 Mar 2010

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The Complete Multipartite Genome Sequence of Cupriavidus necator JMP134, a Versatile Pollutant Degrader

Athanasios Lykidis, Danilo Pérez-Pantoja, Thomas Ledger, Kostantinos Mavromatis, Iain J. Anderson, Natalia N. Ivanova, Sean D. Hooper, Alla Lapidus, Susan Lucas, Bernardo González, Nikos C. Kyrpides

published 22 Mar 2010

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Metagenomes from High-Temperature Chemotrophic Systems Reveal Geochemical Controls on Microbial Community Structure and Function

William P. Inskeep, Douglas B. Rusch, Zackary J. Jay, Markus J. Herrgard, Mark A. Kozubal, Toby H. Richardson, Richard E. Macur, Natsuko Hamamura, Ryan deM. Jennings, Bruce W. Fouke, Anna-Louise Reysenbach, Frank Roberto, Mark Young, Ariel Schwartz, Eric S. Boyd, Jonathan H. Badger, Eric J. Mathur, Alice C. Ortmann, Mary Bateson, Gill Geesey, Marvin Frazier

published 19 Mar 2010

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