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Microbial evolution

Deep phylogenetic-based clustering analysis uncovers new and shared mutations in SARS-CoV-2 variants as a result of directional and convergent evolution

Danilo Rosa Nunes, Carla Torres Braconi, [ ... ], Ricardo Durães-Carvalho

Analysis of temporal changes in HIV-1 CRF01_AE gag genetic variability and CD8 T-cell epitope evolution

Wardah Rafaqat, Uroosa Tariq, [ ... ], Syed Hani Abidi

Genetic characterization of upper respiratory tract virome from nonvaccinated Egyptian cow-calf operations

Abdou Nagy, Fatma Abdallah, [ ... ], Ibrahim Elsohaby

Genomic heterogeneity underlies multidrug resistance in Pseudomonas aeruginosa: A population-level analysis beyond susceptibility testing

Laura J. Rojas, Mohamad Yasmin, [ ... ], Robert A. Bonomo

Consecutive deletions in a unique Uruguayan SARS-CoV-2 lineage evidence the genetic variability potential of accessory genes

Yanina Panzera, Lucía Calleros, [ ... ], Ruben Pérez

Genomic surveillance of SARS-CoV-2 Spike gene by sanger sequencing

Tiago Souza Salles, Andrea Cony Cavalcanti, [ ... ], Renata Campos Azevedo

Divergence together with microbes: A comparative study of the associated microbiomes in the closely related Littorina species

Arina L. Maltseva, Marina A. Varfolomeeva, [ ... ], Andrei I. Granovitch

Local occurrence and fast spread of B.1.1.7 lineage: A glimpse into Friuli Venezia Giulia

Catia Mio, Chiara Dal Secco, [ ... ], Francesco Curcio

Application of principal component analysis on temporal evolution of COVID-19

Ashadun Nobi, Kamrul Hasan Tuhin, Jae Woo Lee

Phylogeography and phylogeny of Rhinoviruses collected from Severe Acute Respiratory Infection (SARI) cases over successive epidemic periods in Tunisia

Sondes Haddad-Boubaker, Cherif Ben Hamda, [ ... ], Hanen Smaoui

Modelling digital and manual contact tracing for COVID-19. Are low uptakes and missed contacts deal-breakers?

Andrei C. Rusu, Rémi Emonet, Katayoun Farrahi

Evaluation of the SARS-CoV-2 positivity ratio and upper respiratory tract viral load among asymptomatic individuals screened before hospitalization or surgery in Flanders, Belgium

Laura Heireman, Steven Abrams, [ ... ], Reinout Naesens

Canine bocavirus-2 infection and its possible association with encephalopathy in domestic dogs

Chutchai Piewbang, Sabrina Wahyu Wardhani, [ ... ], Somporn Techangamsuwan

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