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Microbial evolution

A macroecological perspective on genetic diversity in the human gut microbiome

William R. Shoemaker

published 21 Jul 2023

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SARS-CoV-2 protein structure and sequence mutations: Evolutionary analysis and effects on virus variants

Ugo Lomoio, Barbara Puccio, Giuseppe Tradigo, Pietro Hiram Guzzi, Pierangelo Veltri

published 20 Jul 2023

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Characterizing engagement dynamics across topics on Facebook

Gabriele Etta, Emanuele Sangiorgio, Niccolò Di Marco, Michele Avalle, Antonio Scala, Matteo Cinelli, Walter Quattrociocchi

published 28 Jun 2023

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Model based on COVID-19 evidence to predict and improve pandemic control

Rafael I. González, Pablo S. Moya, Eduardo M. Bringa, Gonzalo Bacigalupe, Muriel Ramírez-Santana, Miguel Kiwi

published 15 Jun 2023

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Genome characterization based on the Spike-614 and NS8-84 loci of SARS-CoV-2 reveals two major possible onsets of the COVID-19 pandemic

Xiaowen Hu, Yaojia Mu, Ruru Deng, Guohui Yi, Lei Yao, Jiaming Zhang

published 15 Jun 2023

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The ecological consequences and evolution of retron-mediated suicide as a way to protect Escherichia coli from being killed by phage

Brandon A. Berryhill, Joshua A. Manuel, Rodrigo Garcia, Bruce R. Levin

published 05 May 2023

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When scientific experts come to be media stars: An evolutionary model tested by analysing coronavirus media coverage across Italian newspapers

Federico Neresini, Paolo Giardullo, Emanuele Di Buccio, Barbara Morsello, Alberto Cammozzo, Andrea Sciandra, Marco Boscolo

published 26 Apr 2023

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Molecular characterization of human respiratory syncytial virus in Seoul, South Korea, during 10 consecutive years, 2010–2019

Ha Nui Kim, Jinha Hwang, Soo-Young Yoon, Chae Seung Lim, Yunjung Cho, Chang-Kyu Lee, Myung-Hyun Nam

published 06 Apr 2023

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Data-driven multiscale dynamical framework to control a pandemic evolution with non-pharmaceutical interventions

Jürgen Reingruber, Andrea Papale, Stéphane Ruckly, Jean-Francois Timsit, David Holcman

published 17 Jan 2023

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Sleep quality and the evolution of the COVID-19 pandemic in five European countries

Samira Barbara Jabakhanji, Anthony Lepinteur, Giorgia Menta, Alan Piper, Claus Vögele

published 28 Dec 2022

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Black Queen Hypothesis, partial privatization, and quorum sensing evolution

Lucas Santana Souza, Yasuhiko Irie, Shigetoshi Eda

published 30 Nov 2022

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The COVID HOME study research protocol: Prospective cohort study of non-hospitalised COVID-19 patients

Adriana Tami, Bernardina T. F. van der Gun, Karin I. Wold, María F. Vincenti-González, Alida C. M. Veloo, Marjolein Knoester, Valerie P. R. Harmsma, Gerolf C. de Boer, Anke L. W. Huckriede, Daniele Pantano, Lilli Gard, Izabela A. Rodenhuis-Zybert, Vinit Upasani, Jolanda Smit, Akkelies E. Dijkstra, Jacco J. de Haan, Jip M. van Elst, Jossy van den Boogaard, Shennae O’ Boyle, Luis Nacul, Hubert G. M. Niesters, Alex W. Friedrich

published 03 Nov 2022

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RASCL: Rapid Assessment of Selection in CLades through molecular sequence analysis

Alexander G. Lucaci, Jordan D. Zehr, Stephen D. Shank, Dave Bouvier, Alexander Ostrovsky, Han Mei, Anton Nekrutenko, Darren P. Martin, Sergei L. Kosakovsky Pond

published 02 Nov 2022

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