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Microbial evolution

Proteotyping to Establish Gene Origin within Reassortant Influenza Viruses

Ji-won Ha, Alexander B. Schwahn, Kevin M. Downard

Dynamics of Viral Evolution and CTL Responses in HIV-1 Infection

Yi Liu, John P. McNevin, [ ... ], James I. Mullins

Evolutionary and Structural Features of the C2, V3 and C3 Envelope Regions Underlying the Differences in HIV-1 and HIV-2 Biology and Infection

Helena Barroso, Pedro Borrego, [ ... ], Nuno Taveira

Taking Multiple Infections of Cells and Recombination into Account Leads to Small Within-Host Effective-Population-Size Estimates of HIV-1

Rajesh Balagam, Vasantika Singh, Aparna Raju Sagi, Narendra M. Dixit

Robust Computational Analysis of rRNA Hypervariable Tag Datasets

Maksim Sipos, Patricio Jeraldo, [ ... ], Nigel Goldenfeld

Dynamics of Glycoprotein Charge in the Evolutionary History of Human Influenza

Nimalan Arinaminpathy, Bryan Grenfell

Evolutionary History and Population Dynamics of Hepatitis E Virus

Michael A. Purdy, Yury E. Khudyakov

Evolution of an Agriculture-Associated Disease Causing Campylobacter coli Clade: Evidence from National Surveillance Data in Scotland

Samuel K. Sheppard, John F. Dallas, [ ... ], Martin C. J. Maiden

Evolution of Cooperative Cross-Feeding Could Be Less Challenging Than Originally Thought

Sylvie Estrela, Ivana Gudelj

Characterization of the Fecal Microbiome from Non-Human Wild Primates Reveals Species Specific Microbial Communities

Suleyman Yildirim, Carl J. Yeoman, [ ... ], Karen E. Nelson

The Threshold Bootstrap Clustering: A New Approach to Find Families or Transmission Clusters within Molecular Quasispecies

Mattia C. F. Prosperi, Andrea De Luca, [ ... ], Marco Salemi

Evolutionary Trajectory of White Spot Syndrome Virus (WSSV) Genome Shrinkage during Spread in Asia

Mark P. Zwart, Bui Thi Minh Dieu, Lia Hemerik, Just M. Vlak

From Grazing Resistance to Pathogenesis: The Coincidental Evolution of Virulence Factors

Sandrine Adiba, Clément Nizak, [ ... ], Frantz Depaulis

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