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Microbial evolution

Acute Phase CD8+ T Lymphocytes against Alternate Reading Frame Epitopes Select for Rapid Viral Escape during SIV Infection

Andrew D. Walsh, Benjamin N. Bimber, Arpita Das, Shari M. Piaskowski, Eva G. Rakasz, Alexander T. Bean, Philip A. Mudd, Adam J. Ericsen, Nancy A. Wilson, Austin L. Hughes, David H. O'Connor, Nicholas J. Maness

published 06 May 2013

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Within-Host Evolution of Staphylococcus aureus during Asymptomatic Carriage

Tanya Golubchik, Elizabeth M. Batty, Ruth R. Miller, Helen Farr, Bernadette C. Young, Hanna Larner-Svensson, Rowena Fung, Heather Godwin, Kyle Knox, Antonina Votintseva, Richard G. Everitt, Teresa Street, Madeleine Cule, Camilla L. C. Ip, Xavier Didelot, Timothy E. A. Peto, Rosalind M. Harding, Daniel J. Wilson, Derrick W. Crook, Rory Bowden

published 01 May 2013

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Novel Phylogenetic Algorithm to Monitor Human Tropism in Egyptian H5N1-HPAIV Reveals Evolution toward Efficient Human-to-Human Transmission

Vladimir R. Perovic, Claude P. Muller, Henry L. Niman, Nevena Veljkovic, Ursula Dietrich, Dusan D. Tosic, Sanja Glisic, Veljko Veljkovic

published 26 Apr 2013

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On Hepatitis C Virus Evolution: The Interaction between Virus and Host towards Treatment Outcome

Cíntia Bittar, Ana Carolina Gomes Jardim, Lilian Hiromi Tomonari Yamasaki, Claudia Márcia Aparecida Carareto, João Renato Rebello Pinho, Philippe Lemey, Isabel Maria Vicente Guedes de Carvalho-Mello, Paula Rahal

published 25 Apr 2013

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In Vitro HIV-1 Evolution in Response to Triple Reverse Transcriptase Inhibitors & In Silico Phenotypic Analysis

Barbara A. Rath, Kaveh Pouran Yousef, David K. Katzenstein, Robert W. Shafer, Christof Schütte, Max von Kleist, Thomas C. Merigan

published 17 Apr 2013

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Exploring the Molecular Epidemiology and Evolutionary Dynamics of Influenza A Virus in Taiwan

Jih-Hui Lin, Shu-Chun Chiu, Yung-Cheng Lin, Ju-Chien Cheng, Ho-Sheng Wu, Marco Salemi, Hsin-Fu Liu

published 16 Apr 2013

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Mean Protein Evolutionary Distance: A Method for Comparative Protein Evolution and Its Application

Michael J. Wise

published 15 Apr 2013

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Robustness of Helicobacter pylori Infection Conferred by Context-Variable Redundancy among Cysteine-Rich Paralogs

Kalyani Putty, Sarah A. Marcus, Peer R. E. Mittl, Lindsey E. Bogadi, Allison M. Hunter, Swathi Arur, Douglas E. Berg, Palaniappan Sethu, Awdhesh Kalia

published 26 Mar 2013

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Epidemiology and Evolution of Rotaviruses and Noroviruses from an Archival WHO Global Study in Children (1976–79) with Implications for Vaccine Design

Lauren A. Rackoff, Karin Bok, Kim Y. Green, Albert Z. Kapikian

published 25 Mar 2013

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Selection Affects Genes Involved in Replication during Long-Term Evolution in Experimental Populations of the Bacteriophage φX174

Celeste J. Brown, Jack Millstein, Christopher J. Williams, Holly A. Wichman

published 22 Mar 2013

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General Patterns of Diversity in Major Marine Microeukaryote Lineages

Massimo C. Pernice, Ramiro Logares, Laure Guillou, Ramon Massana

published 21 Feb 2013

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Complete Genome Analysis of the C4 Subgenotype Strains of Enterovirus 71: Predominant Recombination C4 Viruses Persistently Circulating in China for 14 Years

Yan Zhang, Xiaojuan Tan, Aili Cui, Naiying Mao, Songtao Xu, Zhen Zhu, Jianhui Zhou, Jing Shi, Yueping Zhao, Xianjun Wang, Xueyong Huang, Shuangli Zhu, Yong Zhang, Wei Tang, Hua Ling, Wenbo Xu

published 18 Feb 2013

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Phylogenetic Analysis of Enterovirus 71 Circulating in Beijing, China from 2007 to 2009

Junping Zhu, Zhen Luo, Juan Wang, Zigang Xu, Hui Chen, Dongying Fan, Na Gao, Guoling Ping, Zhen Zhou, Yan Zhang, Jing An

published 13 Feb 2013

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