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Microbial evolution

Investigating the evolutionary dynamics and mutational pattern of SARS-CoV-2 spike gene on selected SARS-CoV-2 variants

Bachir Balech, Alessandra Lo Presti, [ ... ], on behalf of the Italian Genomic Laboratory Network

SARS-CoV-2 sequencing artifacts associated with targeted PCR enrichment and read mapping

Kirsten Maren Ellegaard, Vithiagaran Gunalan, [ ... ], Marc Stegger

Identification and genetic characterization of Jingmen tick virus from ticks sampled in select regions of Kenya; 2022–2024

Lydia Mwasi, Samoel Khamadi, [ ... ], Fredrick Eyase

Passage of human-origin influenza A virus in swine tracheal epithelial cells selects for adaptive mutations in the hemagglutinin gene

Jongsuk Mo, Lucas M. Ferreri, [ ... ], Daniela S. Rajao

Deciphering the genetic landscape of tomato leaf curl New Delhi virus: Dynamic and region-specific diversity revealed by comprehensive sequence analyses

Zafar Iqbal, Adil Alshoaibi, [ ... ], Khaled Muhammad Amin Ramadan

Variant evolution graph: Can we infer how SARS-CoV-2 variants are evolving?

Badhan Das, Lenwood S. Heath

Evolution and classification of Ser/Thr phosphatase PP2C family in bacteria: Sequence conservation, structures, domain distribution

Hang Li, Rui Li, [ ... ], Hong Feng

Whole genome sequencing and molecular detection of potato virus X in Bangladesh

Md. Shafiqul Islam, Md. Akash Ahammed, [ ... ], Md. Mosharraf Hossain Molla

Transmission matrix parameter estimation of COVID-19 evolution with age compartments using ensemble-based data assimilation

Santiago Rosa, Manuel A. Pulido, Juan J. Ruiz, Tadeo J. Cocucci

Increased preference for lysine over arginine in spike proteins of SARS-CoV-2 BA.2.86 variant and its daughter lineages

Anže Božič, Rudolf Podgornik

Microevolution and phylogenomic study of Respiratory Syncytial Virus type A

Ashfaq Ahmad, Sidra Majaz, [ ... ], Atta Ur Rehman

Whole-genome sequence analysis of SFTS bunyavirus in Huzhou, China

Deshun Xu, Lei Ji, Xiaofang Wu, Liping Chen

Trait and plasticity evolution under competition and mutualism in evolving pairwise yeast communities

ShengPei Wang, Renuka Agarwal, Kari A. Segraves, David M. Althoff

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