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Microbial evolution

Early Antiretroviral Therapy During Primary HIV-1 Infection Results in a Transient Reduction of the Viral Setpoint upon Treatment Interruption

Viktor von Wyl, Sara Gianella, [ ... ], the Swiss HIV Cohort Study (SHCS)

Gnarled-Trunk Evolutionary Model of Influenza A Virus Hemagglutinin

Kimihito Ito, Manabu Igarashi, [ ... ], Ayato Takada

Re-thinking the evolution of microblade technology in East Asia: Techno-functional understanding of the lithic assemblage from Shizitan 29 (Shanxi, China)

Yanhua Song, Stefano Grimaldi, [ ... ], Ofer Bar-Yosef

ODoSE: A Webserver for Genome-Wide Calculation of Adaptive Divergence in Prokaryotes

Michiel Vos, Tim A. H. te Beek, [ ... ], Mark W. J. van Passel

Genome Sequencing and Phylogenetic Analysis of 39 Human Parainfluenza Virus Type 1 Strains Isolated from 1997–2010

Eric T. Beck, Jie He, [ ... ], Kelly J. Henrickson

A Method for the Simultaneous Estimation of Selection Intensities in Overlapping Genes

Niv Sabath, Giddy Landan, Dan Graur

Wide Distribution of O157-Antigen Biosynthesis Gene Clusters in Escherichia coli

Atsushi Iguchi, Hiroki Shirai, [ ... ], Ro Osawa

The Molecular and Genetic Basis of Repeatable Coevolution between Escherichia coli and Bacteriophage T3 in a Laboratory Microcosm

Elizabeth B. Perry, Jeffrey E. Barrick, Brendan J. M. Bohannan

Application of principal component analysis on temporal evolution of COVID-19

Ashadun Nobi, Kamrul Hasan Tuhin, Jae Woo Lee

The Impact of Resource Availability on Bacterial Resistance to Phages in Soil

Pedro Gómez, Jonathan Bennie, Kevin J. Gaston, Angus Buckling

Evolutionary Dynamics Analysis of Human Metapneumovirus Subtype A2: Genetic Evidence for Its Dominant Epidemic

Jianguo Li, Lili Ren, [ ... ], Jianwei Wang

Recombination Blurs Phylogenetic Groups Routine Assignment in Escherichia coli: Setting the Record Straight

María-Carmen Turrientes, José-María González-Alba, [ ... ], Juan Carlos Galán

Cryptic Fitness Advantage: Diploids Invade Haploid Populations Despite Lacking Any Apparent Advantage as Measured by Standard Fitness Assays

Aleeza C. Gerstein, Sarah P. Otto

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