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Microbial ecosystems

Metabolic Proximity in the Order of Colonization of a Microbial Community

Varun Mazumdar, Salomon Amar, Daniel Segrè

published 30 Oct 2013

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Shifts in the Microbial Community Composition of Gulf Coast Beaches Following Beach Oiling

Ryan J. Newton, Susan M. Huse, Hilary G. Morrison, Colin S. Peake, Mitchell L. Sogin, Sandra L. McLellan

published 10 Sep 2013

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Characterization of Epiphytic Bacterial Communities from Grapes, Leaves, Bark and Soil of Grapevine Plants Grown, and Their Relations

Guilherme Martins, Béatrice Lauga, Cécile Miot-Sertier, Anne Mercier, Aline Lonvaud, Marie-Louise Soulas, Guy Soulas, Isabelle Masneuf-Pomarède

published 30 Aug 2013

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NaOH-Debittering Induces Changes in Bacterial Ecology during Table Olives Fermentation

Luca Cocolin, Valentina Alessandria, Cristian Botta, Roberta Gorra, Francesca De Filippis, Danilo Ercolini, Kalliopi Rantsiou

published 31 Jul 2013

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Long-Term Temporal Analysis of the Human Fecal Microbiota Revealed a Stable Core of Dominant Bacterial Species

Inés Martínez, Catherine E. Muller, Jens Walter

published 16 Jul 2013

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Long-Term Nitrogen Amendment Alters the Diversity and Assemblage of Soil Bacterial Communities in Tallgrass Prairie

Joseph D. Coolon, Kenneth L. Jones, Timothy C. Todd, John M. Blair, Michael A. Herman

published 28 Jun 2013

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Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic Scale

David J. Van Horn, M. Lee Van Horn, John E. Barrett, Michael N. Gooseff, Adam E. Altrichter, Kevin M. Geyer, Lydia H. Zeglin, Cristina D. Takacs-Vesbach

published 18 Jun 2013

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Exploring the Dynamic Core Microbiome of Plaque Microbiota during Head-and-Neck Radiotherapy Using Pyrosequencing

Yue-jian Hu, Zi-yang Shao, Qian Wang, Yun-tao Jiang, Rui Ma, Zi-sheng Tang, Zheng Liu, Jing-ping Liang, Zheng-wei Huang

published 21 Feb 2013

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Rhizobia with 16S rRNA and nifH Similar to Mesorhizobium huakuii but Novel recA, glnII, nodA and nodC Genes Are Symbionts of New Zealand Carmichaelinae

Heng Wee Tan, Bevan S. Weir, Noel Carter, Peter B. Heenan, Hayley J. Ridgway, Euan K. James, Janet I. Sprent, J. Peter W. Young, Mitchell Andrews

published 31 Oct 2012

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Analysis of the Cystic Fibrosis Lung Microbiota via Serial Illumina Sequencing of Bacterial 16S rRNA Hypervariable Regions

Heather Maughan, Pauline W. Wang, Julio Diaz Caballero, Pauline Fung, Yunchen Gong, Sylva L. Donaldson, Lijie Yuan, Shaf Keshavjee, Yu Zhang, Yvonne C. W. Yau, Valerie J. Waters, D. Elizabeth Tullis, David M. Hwang, David S. Guttman

published 02 Oct 2012

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Biofilms of a Bacillus subtilis Hospital Isolate Protect Staphylococcus aureus from Biocide Action

Arnaud Bridier, Maria del Pilar Sanchez-Vizuete, Dominique Le Coq, Stéphane Aymerich, Thierry Meylheuc, Jean-Yves Maillard, Vincent Thomas, Florence Dubois-Brissonnet, Romain Briandet

published 04 Sep 2012

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A Metagenomic Approach to Characterization of the Vaginal Microbiome Signature in Pregnancy

Kjersti Aagaard, Kevin Riehle, Jun Ma, Nicola Segata, Toni-Ann Mistretta, Cristian Coarfa, Sabeen Raza, Sean Rosenbaum, Ignatia Van den Veyver, Aleksandar Milosavljevic, Dirk Gevers, Curtis Huttenhower, Joseph Petrosino, James Versalovic

published 13 Jun 2012

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Deep Sequencing of the Oral Microbiome Reveals Signatures of Periodontal Disease

Bo Liu, Lina L. Faller, Niels Klitgord, Varun Mazumdar, Mohammad Ghodsi, Daniel D. Sommer, Theodore R. Gibbons, Todd J. Treangen, Yi-Chien Chang, Shan Li, O. Colin Stine, Hatice Hasturk, Simon Kasif, Daniel Segrè, Mihai Pop, Salomon Amar

published 04 Jun 2012

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