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Microbial ecology

Pyocyanin Promotes Extracellular DNA Release in Pseudomonas aeruginosa

Theerthankar Das, Mike Manefield

published 08 Oct 2012

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Characterization of the Fecal Microbiota Using High-Throughput Sequencing Reveals a Stable Microbial Community during Storage

Ian M. Carroll, Tamar Ringel-Kulka, Jennica P. Siddle, Todd R. Klaenhammer, Yehuda Ringel

published 05 Oct 2012

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Analysis of the Cystic Fibrosis Lung Microbiota via Serial Illumina Sequencing of Bacterial 16S rRNA Hypervariable Regions

Heather Maughan, Pauline W. Wang, Julio Diaz Caballero, Pauline Fung, Yunchen Gong, Sylva L. Donaldson, Lijie Yuan, Shaf Keshavjee, Yu Zhang, Yvonne C. W. Yau, Valerie J. Waters, D. Elizabeth Tullis, David M. Hwang, David S. Guttman

published 02 Oct 2012

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Soil Bacterial Diversity Screening Using Single 16S rRNA Gene V Regions Coupled with Multi-Million Read Generating Sequencing Technologies

Sotirios Vasileiadis, Edoardo Puglisi, Maria Arena, Fabrizio Cappa, Pier S. Cocconcelli, Marco Trevisan

published 06 Aug 2012

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Co-Localized or Randomly Distributed? Pair Cross Correlation of In Vivo Grown Subgingival Biofilm Bacteria Quantified by Digital Image Analysis

Claudia Schillinger, Annett Petrich, Renate Lux, Birgit Riep, Judith Kikhney, Anton Friedmann, Lawrence E. Wolinsky, Ulf B. Göbel, Holger Daims, Annette Moter

published 24 May 2012

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Human Occupancy as a Source of Indoor Airborne Bacteria

Denina Hospodsky, Jing Qian, William W. Nazaroff, Naomichi Yamamoto, Kyle Bibby, Hamid Rismani-Yazdi, Jordan Peccia

published 18 Apr 2012

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Reanalysis and Simulation Suggest a Phylogenetic Microarray Does Not Accurately Profile Microbial Communities

David J. Midgley, Paul Greenfield, Janet M. Shaw, Yalchin Oytam, Dongmei Li, Caroline A. Kerr, Philip Hendry

published 22 Mar 2012

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A Format for Phylogenetic Placements

Frederick A. Matsen, Noah G. Hoffman, Aaron Gallagher, Alexandros Stamatakis

published 22 Feb 2012

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Branched Chain Fatty Acids Reduce the Incidence of Necrotizing Enterocolitis and Alter Gastrointestinal Microbial Ecology in a Neonatal Rat Model

Rinat R. Ran-Ressler, Ludmila Khailova, Kelly M. Arganbright, Camille K. Adkins-Rieck, Zeina E. Jouni, Omry Koren, Ruth E. Ley, J. Thomas Brenna, Bohuslav Dvorak

published 14 Dec 2011

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The Influence of Staphylococcus aureus on Gut Microbial Ecology in an In Vitro Continuous Culture Human Colonic Model System

Thippeswamy H. Sannasiddappa, Adele Costabile, Glenn R. Gibson, Simon R. Clarke

published 09 Aug 2011

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Extrapolation of Urn Models via Poissonization: Accurate Measurements of the Microbial Unknown

Manuel E. Lladser, Raúl Gouet, Jens Reeder

published 28 Jun 2011

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Fecal Microbiota in Premature Infants Prior to Necrotizing Enterocolitis

Volker Mai, Christopher Michael Young, Maria Ukhanova, Xiaoyu Wang, Yijun Sun, George Casella, Douglas Theriaque, Nan Li, Renu Sharma, Mark Hudak, Josef Neu

published 06 Jun 2011

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Application of Two-Part Statistics for Comparison of Sequence Variant Counts

Brandie D. Wagner, Charles E. Robertson, J. Kirk Harris

published 23 May 2011

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