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Microbial ecology

Rarity of microbial species: In search of reliable associations

Arnaud Cougoul, Xavier Bailly, Gwenaël Vourc’h, Patrick Gasqui

published 15 Mar 2019

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Composition of gut microbiota in patients with toxigenic Clostridioides (Clostridium) difficile: Comparison between subgroups according to clinical criteria and toxin gene load

Sung-Hee Han, Joowon Yi, Ji-Hoon Kim, SangWon Lee, Hee-Won Moon

published 20 Feb 2019

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A unified framework for unconstrained and constrained ordination of microbiome read count data

Stijn Hawinkel, Frederiek-Maarten Kerckhof, Luc Bijnens, Olivier Thas

published 13 Feb 2019

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Delayed differentiation of vaginal and uterine microbiomes in dairy cows developing postpartum endometritis

Raúl Miranda-CasoLuengo, Junnan Lu, Erin J. Williams, Aleksandra A. Miranda-CasoLuengo, Stephen D. Carrington, Alexander C. O. Evans, Wim G. Meijer

published 10 Jan 2019

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Effects of urbanization on the foraging ecology and microbiota of the generalist seabird Larus argentatus

Matthew Fuirst, Richard R. Veit, Megan Hahn, Nolwenn Dheilly, Lesley H. Thorne

published 18 Dec 2018

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Obesity alters composition and diversity of the oral microbiota in patients with type 2 diabetes mellitus independently of glycemic control

Jonathan Tam, Thomas Hoffmann, Sabine Fischer, Stefan Bornstein, Jürgen Gräßler, Barbara Noack

published 01 Oct 2018

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Green forage and fattening duration differentially modulate cecal microbiome of Wanxi white geese

Xingyong Chen, Xue Liu, Yeye Du, Bin Wang, Ning Zhao, Zhaoyu Geng

published 25 Sep 2018

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Multiplexed chemostat system for quantification of biodiversity and ecosystem functioning in anaerobic digestion

Diane Plouchart, Kim Milferstedt, Guillaume Guizard, Eric Latrille, Jérôme Hamelin

published 08 Mar 2018

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Measuring the microbiome of chronic wounds with use of a topical antimicrobial dressing – A feasibility study

Lindsay Kalan, Mi Zhou, Michele Labbie, Benjamin Willing

published 20 Nov 2017

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Statistical analysis of co-occurrence patterns in microbial presence-absence datasets

Kumar P. Mainali, Sharon Bewick, Peter Thielen, Thomas Mehoke, Florian P. Breitwieser, Shishir Paudel, Arjun Adhikari, Joshua Wolfe, Eric V. Slud, David Karig, William F. Fagan

published 16 Nov 2017

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Oral microbial community assembly under the influence of periodontitis

Hongju Chen, Shuting Peng, Lin Dai, Quan Zou, Bin Yi, Xianghong Yang, Zhanshan (Sam) Ma

published 16 Aug 2017

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Assessment of gut microbiota populations in lean and obese Zucker rats

Reza Hakkak, Soheila Korourian, Steven L. Foley, Bruce D. Erickson

published 13 Jul 2017

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Environmental bacteriophages active on biofilms and planktonic forms of toxigenic Vibrio cholerae: Potential relevance in cholera epidemiology

Iftekhar Bin Naser, M. Mozammel Hoque, Ahmed Abdullah, S. M. Nayeemul Bari, Amar N. Ghosh, Shah M. Faruque

published 10 Jul 2017

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