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Microbial ecology

Replicable simulation of distal hot water premise plumbing using convectively-mixed pipe reactors

M. Storme Spencer, Abraham C. Cullom, [ ... ], Marc A. Edwards

Patient propagules: Do soil archives preserve the legacy of fungal and prokaryotic communities?

Gian Maria Niccolò Benucci, Bryan Rennick, Gregory Bonito

The Community Simulator: A Python package for microbial ecology

Robert Marsland, Wenping Cui, Joshua Goldford, Pankaj Mehta

Changes in key vaginal bacteria among postpartum African women initiating intramuscular depot-medroxyprogesterone acetate

Bridget M. Whitney, Brandon L. Guthrie, [ ... ], Alison C. Roxby

Duckweed hosts a taxonomically similar bacterial assemblage as the terrestrial leaf microbiome

Kenneth Acosta, Jenny Xu, [ ... ], Eric Lam

The gut bacterial communities across six grasshopper species from a coastal tallgrass prairie

Melani Muratore, Chelse Prather, Yvonne Sun

Comparing bioinformatic pipelines for microbial 16S rRNA amplicon sequencing

Andrei Prodan, Valentina Tremaroli, [ ... ], Evgeni Levin

Biomarker discovery in inflammatory bowel diseases using network-based feature selection

Mostafa Abbas, John Matta, [ ... ], Yasser EL-Manzalawy

Machine learning to predict microbial community functions: An analysis of dissolved organic carbon from litter decomposition

Jaron Thompson, Renee Johansen, John Dunbar, Brian Munsky

Identification of the microbial diversity after fecal microbiota transplantation therapy for chronic intractable constipation using 16s rRNA amplicon sequencing

Tadashi Ohara

Rarity of microbial species: In search of reliable associations

Arnaud Cougoul, Xavier Bailly, Gwenaël Vourc’h, Patrick Gasqui

Composition of gut microbiota in patients with toxigenic Clostridioides (Clostridium) difficile: Comparison between subgroups according to clinical criteria and toxin gene load

Sung-Hee Han, Joowon Yi, [ ... ], Hee-Won Moon

A unified framework for unconstrained and constrained ordination of microbiome read count data

Stijn Hawinkel, Frederiek-Maarten Kerckhof, Luc Bijnens, Olivier Thas

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