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Microbial ecology

Breastfeeding patterns are associated with human milk microbiome composition: The Mother-Infant Microbiomes, Behavior, and Ecology Study (MIMBES)

Elizabeth A. Holdsworth, Janet E. Williams, Ryan M. Pace, Avery A. Lane, Maria Gartstein, Mark A. McGuire, Michelle K. McGuire, Courtney L. Meehan

published 09 Aug 2023

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Multi-amplicon microbiome data analysis pipelines for mixed orientation sequences using QIIME2: Assessing reference database, variable region and pre-processing bias in classification of mock bacterial community samples

Katherine A. Maki, Brian Wolff, Leonardo Varuzza, Stefan J. Green, Jennifer J. Barb

published 13 Jan 2023

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The gut microbiome of wild American marten in the Upper Peninsula of Michigan

Diana J. R. Lafferty, Erin A. McKenney, Sierra J. Gillman, Chris D. Kailing, Myles C. Walimaa, Macy J. Kailing, Brian J. Roell

published 03 Nov 2022

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Minimal overall divergence of the gut microbiome in an adaptive radiation of Cyprinodon pupfishes despite potential adaptive enrichment for scale-eating

Joseph Heras, Christopher H. Martin

published 16 Sep 2022

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Differences in the subgingival microbiome according to stage of periodontitis: A comparison of two geographic regions

Gloria Inés Lafaurie, Yineth Neuta, Rafael Ríos, Mauricio Pacheco-Montealegre, Roquelina Pianeta, Diana Marcela Castillo, David Herrera, Jinnethe Reyes, Lorena Diaz, Yormaris Castillo, Mariano Sanz, Margarita Iniesta

published 23 Aug 2022

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A global meta-analysis of animal manure application and soil microbial ecology based on random control treatments

Zhenhua Guo, Lei Lv, Di Liu, Xinmiao He, Wentao Wang, Yanzhong Feng, Md. Saiful Islam, Qiuju Wang, Wengui Chen, Ziguang Liu, Saihui Wu, Adam Abied

published 21 Jan 2022

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A biogeographic 16S rRNA survey of bacterial communities of ureolytic biomineralization from California public restrooms

Kahui Lim, Matthew Rolston, Samantha Barnum, Cara Wademan, Harold Leverenz

published 14 Jan 2022

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Divergence together with microbes: A comparative study of the associated microbiomes in the closely related Littorina species

Arina L. Maltseva, Marina A. Varfolomeeva, Elizaveta R. Gafarova, Marina A. Z. Panova, Natalia A. Mikhailova, Andrei I. Granovitch

published 21 Dec 2021

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Bacterial community structure of early-stage biofilms is dictated by temporal succession rather than substrate types in the southern coastal seawater of India

T. J. Sushmitha, Meora Rajeev, P. Sriyutha Murthy, S. Ganesh, Subba Rao Toleti, Shunmugiah Karutha Pandian

published 27 Sep 2021

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Biodiversity of marine microbes is safeguarded by phenotypic heterogeneity in ecological traits

Susanne Menden-Deuer, Julie Rowlett, Medet Nursultanov, Sinead Collins, Tatiana Rynearson

published 04 Aug 2021

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Microbiome of the wasp Vespula pensylvanica in native and invasive populations, and associations with Moku virus

Jason A. Rothman, Kevin J. Loope, Quinn S. McFrederick, Erin E. Wilson Rankin

published 29 Jul 2021

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Comparison of wild rice (Oryza longistaminata) tissues identifies rhizome-specific bacterial and archaeal endophytic microbiomes communities and network structures

Xiaojue Peng, Jian Xie, Wenzhuo Li, Hongwei Xie, Yaohui Cai, Xia Ding

published 08 Feb 2021

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Consistent patterns in 16S and 18S microbial diversity from the shells of the common and widespread red-eared slider turtle (Trachemys scripta)

Matthew Parks, Cameron Kedy, Casey Skalla

published 28 Dec 2020

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