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Machine learning

Analysis of Antisense Expression by Whole Genome Tiling Microarrays and siRNAs Suggests Mis-Annotation of Arabidopsis Orphan Protein-Coding Genes

Casey R. Richardson, Qing-Jun Luo, Viktoria Gontcharova, Ying-Wen Jiang, Manoj Samanta, Eunseog Youn, Christopher D. Rock

published 26 May 2010

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Mechanisms of Maximum Information Preservation in the Drosophila Antennal Lobe

Ryota Satoh, Masafumi Oizumi, Hokto Kazama, Masato Okada

published 21 May 2010

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Inference of Functional Relations in Predicted Protein Networks with a Machine Learning Approach

Beatriz García-Jiménez, David Juan, Iakes Ezkurdia, Eduardo Andrés-León, Alfonso Valencia

published 01 Apr 2010

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FaaPred: A SVM-Based Prediction Method for Fungal Adhesins and Adhesin-Like Proteins

Jayashree Ramana, Dinesh Gupta

published 15 Mar 2010

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Predicting Drug-Target Interaction Networks Based on Functional Groups and Biological Features

Zhisong He, Jian Zhang, Xiao-He Shi, Le-Le Hu, Xiangyin Kong, Yu-Dong Cai, Kuo-Chen Chou

published 11 Mar 2010

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Bayesian Markov Random Field Analysis for Protein Function Prediction Based on Network Data

Yiannis A. I. Kourmpetis, Aalt D. J. van Dijk, Marco C. A. M. Bink, Roeland C. H. J. van Ham, Cajo J. F. ter Braak

published 24 Feb 2010

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Urinary Volatile Compounds as Biomarkers for Lung Cancer: A Proof of Principle Study Using Odor Signatures in Mouse Models of Lung Cancer

Koichi Matsumura, Maryanne Opiekun, Hiroaki Oka, Anil Vachani, Steven M. Albelda, Kunio Yamazaki, Gary K. Beauchamp

published 27 Jan 2010

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A Neurosemantic Theory of Concrete Noun Representation Based on the Underlying Brain Codes

Marcel Adam Just, Vladimir L. Cherkassky, Sandesh Aryal, Tom M. Mitchell

published 13 Jan 2010

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Exploiting Amino Acid Composition for Predicting Protein-Protein Interactions

Sushmita Roy, Diego Martinez, Harriett Platero, Terran Lane, Margaret Werner-Washburne

published 20 Nov 2009

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Comparing Artificial Neural Networks, General Linear Models and Support Vector Machines in Building Predictive Models for Small Interfering RNAs

Kyle A. McQuisten, Andrew S. Peek

published 22 Oct 2009

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Multiple Sclerosis: MicroRNA Expression Profiles Accurately Differentiate Patients with Relapsing-Remitting Disease from Healthy Controls

Andreas Keller, Petra Leidinger, Julia Lange, Anne Borries, Hannah Schroers, Matthias Scheffler, Hans-Peter Lenhof, Klemens Ruprecht, Eckart Meese

published 13 Oct 2009

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An Introspective Comparison of Random Forest-Based Classifiers for the Analysis of Cluster-Correlated Data by Way of RF++

Yuliya V. Karpievitch, Elizabeth G. Hill, Anthony P. Leclerc, Alan R. Dabney, Jonas S. Almeida

published 18 Sep 2009

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Using Expression and Genotype to Predict Drug Response in Yeast

Douglas M. Ruderfer, David C. Roberts, Stuart L. Schreiber, Ethan O. Perlstein, Leonid Kruglyak

published 04 Sep 2009

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